Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0047 |
Symbol | |
ID | 4600098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 52863 |
End bp | 54101 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639774662 |
Product | Formyl-CoA transferase |
Protein accession | YP_921284 |
Protein GI | 119714319 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.386629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAGG CCGAAGCCGC TGTGCTGCCG TTGTCGGGGG TGCGGGTGGT GGACCTGACC CGGGCGTTGT CGGGTCCGTT CTGCACGATG CTGCTGGGCG ACCAGGGCGC CGAGGTGGTC AAGATCGAGC GGCCGGTGGT CGGGGACGAC ACCCGGCGCC AGTCCAACCC GATGGTGGGT ACGGAGAACT CCGCGTTCTT GGCGGTCAAC CGCAACAAGC GCAGCGTGGC GGTCGACCTG CGCGCCGAGG CGGGGGTCGA GGTGGTGCGG CGGCTGGTCG CGGTCAGCGA CGTGGTCGTG GAGAACTTCC GGCCCGGCAA GGCCGAGCAG ATGGGGCTGG GCTACGAGCA GCTGCGCGAG CTCAACCCGG GGCTGGTCTA CTGCTCGATC TCGGGGTGGG GCAGCGACGG GCCCTACGCC GCGCGGGGTG GGTACGCCTC GACCGCCGAG GCCGCCGGCG GGCTGATGAG CGTCACCGGC GAGCGCGGCC GGGGCCCGGT CAAGGTCGGG GTCTCCATCG TGGACTCCCT GACCGGCCTG TACGCCAAGG ACGCCATCAC CGCCGCCCTC CTGGCCCGCG TCCGCACCGG CGTGGGCCAG AAGGTCGAGA CCTCACTGCT GGAGTCGACC GTCTCCATCC TGTCGATGTC GGCCTACGCC TACCTCCTCG GCGGCGTCGT CGCCGGCCGC TGGGGCTCCG AGCACCAGTG GAACGTCCCC TGGAAGGCCT TCGAGACCAC CGACGGCTAC GTCGTGGTGG CGAGCAGCTC CGAGGAGCAG TGGCGCAAGA TCTGCGTGGG CATCGAGCGG CCCGACCTGC TCGAGGACCC CCGGTTCACC ACCATGGCCG ACCGCGCCGC GCACCGCGAG ATCCTCTACG CCCTCCTCGA CGAGGTCTTC GCCACCCACA CCACCCACGA CTGGGTCGCG CGCCTGGACG CCGTCGGCGC CGCCGCCGCC CCCGTCAACA CCATCGACCA GGTCTTCGCC GACCCCCAGG TCCTGGCCCG CGACATGCTC CAGAGCGTCG AACACCCCAC CCTGGGCCCG ATCGCCCAGG TCGGCCACGC CCAGAAGCTC CACGGCACCC CCCACCAGAT CACCCTCCCC CCGCCCCTGC TCGGCCAGCA CACCCGCGAG GTCCTCACCG ACCTCGGCGG CTACACCCCC GACGAGATCG ACGAGCTCGC CCGCGACGGG GTGGTGGGTG TGGCCGACCA CCCCGCCGCG ACGGCGTGA
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Protein sequence | MVKAEAAVLP LSGVRVVDLT RALSGPFCTM LLGDQGAEVV KIERPVVGDD TRRQSNPMVG TENSAFLAVN RNKRSVAVDL RAEAGVEVVR RLVAVSDVVV ENFRPGKAEQ MGLGYEQLRE LNPGLVYCSI SGWGSDGPYA ARGGYASTAE AAGGLMSVTG ERGRGPVKVG VSIVDSLTGL YAKDAITAAL LARVRTGVGQ KVETSLLEST VSILSMSAYA YLLGGVVAGR WGSEHQWNVP WKAFETTDGY VVVASSSEEQ WRKICVGIER PDLLEDPRFT TMADRAAHRE ILYALLDEVF ATHTTHDWVA RLDAVGAAAA PVNTIDQVFA DPQVLARDML QSVEHPTLGP IAQVGHAQKL HGTPHQITLP PPLLGQHTRE VLTDLGGYTP DEIDELARDG VVGVADHPAA TA
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