Gene Noca_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0047 
Symbol 
ID4600098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp52863 
End bp54101 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID639774662 
ProductFormyl-CoA transferase 
Protein accessionYP_921284 
Protein GI119714319 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.386629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGG CCGAAGCCGC TGTGCTGCCG TTGTCGGGGG TGCGGGTGGT GGACCTGACC 
CGGGCGTTGT CGGGTCCGTT CTGCACGATG CTGCTGGGCG ACCAGGGCGC CGAGGTGGTC
AAGATCGAGC GGCCGGTGGT CGGGGACGAC ACCCGGCGCC AGTCCAACCC GATGGTGGGT
ACGGAGAACT CCGCGTTCTT GGCGGTCAAC CGCAACAAGC GCAGCGTGGC GGTCGACCTG
CGCGCCGAGG CGGGGGTCGA GGTGGTGCGG CGGCTGGTCG CGGTCAGCGA CGTGGTCGTG
GAGAACTTCC GGCCCGGCAA GGCCGAGCAG ATGGGGCTGG GCTACGAGCA GCTGCGCGAG
CTCAACCCGG GGCTGGTCTA CTGCTCGATC TCGGGGTGGG GCAGCGACGG GCCCTACGCC
GCGCGGGGTG GGTACGCCTC GACCGCCGAG GCCGCCGGCG GGCTGATGAG CGTCACCGGC
GAGCGCGGCC GGGGCCCGGT CAAGGTCGGG GTCTCCATCG TGGACTCCCT GACCGGCCTG
TACGCCAAGG ACGCCATCAC CGCCGCCCTC CTGGCCCGCG TCCGCACCGG CGTGGGCCAG
AAGGTCGAGA CCTCACTGCT GGAGTCGACC GTCTCCATCC TGTCGATGTC GGCCTACGCC
TACCTCCTCG GCGGCGTCGT CGCCGGCCGC TGGGGCTCCG AGCACCAGTG GAACGTCCCC
TGGAAGGCCT TCGAGACCAC CGACGGCTAC GTCGTGGTGG CGAGCAGCTC CGAGGAGCAG
TGGCGCAAGA TCTGCGTGGG CATCGAGCGG CCCGACCTGC TCGAGGACCC CCGGTTCACC
ACCATGGCCG ACCGCGCCGC GCACCGCGAG ATCCTCTACG CCCTCCTCGA CGAGGTCTTC
GCCACCCACA CCACCCACGA CTGGGTCGCG CGCCTGGACG CCGTCGGCGC CGCCGCCGCC
CCCGTCAACA CCATCGACCA GGTCTTCGCC GACCCCCAGG TCCTGGCCCG CGACATGCTC
CAGAGCGTCG AACACCCCAC CCTGGGCCCG ATCGCCCAGG TCGGCCACGC CCAGAAGCTC
CACGGCACCC CCCACCAGAT CACCCTCCCC CCGCCCCTGC TCGGCCAGCA CACCCGCGAG
GTCCTCACCG ACCTCGGCGG CTACACCCCC GACGAGATCG ACGAGCTCGC CCGCGACGGG
GTGGTGGGTG TGGCCGACCA CCCCGCCGCG ACGGCGTGA
 
Protein sequence
MVKAEAAVLP LSGVRVVDLT RALSGPFCTM LLGDQGAEVV KIERPVVGDD TRRQSNPMVG 
TENSAFLAVN RNKRSVAVDL RAEAGVEVVR RLVAVSDVVV ENFRPGKAEQ MGLGYEQLRE
LNPGLVYCSI SGWGSDGPYA ARGGYASTAE AAGGLMSVTG ERGRGPVKVG VSIVDSLTGL
YAKDAITAAL LARVRTGVGQ KVETSLLEST VSILSMSAYA YLLGGVVAGR WGSEHQWNVP
WKAFETTDGY VVVASSSEEQ WRKICVGIER PDLLEDPRFT TMADRAAHRE ILYALLDEVF
ATHTTHDWVA RLDAVGAAAA PVNTIDQVFA DPQVLARDML QSVEHPTLGP IAQVGHAQKL
HGTPHQITLP PPLLGQHTRE VLTDLGGYTP DEIDELARDG VVGVADHPAA TA