Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0039 |
Symbol | |
ID | 4600090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 43915 |
End bp | 45135 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639774654 |
Product | Formyl-CoA transferase |
Protein accession | YP_921276 |
Protein GI | 119714311 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAGC GTCCGGGGGA GCTGCTGCCG TTGTCGGGGG TGCGGGTGGT GGACCTGACC CGGGCGTTGT CGGGTCCGTT CTGCACGATG CTGCTGGGCG ACCAGGGCGC CGAGGTGGTC AAGATCGAGC GGCCGGTGGT CGGGGACGAC ACCCGGCGCC AGTCCAACCC GATGGTGGGT ACGGAGAACT CCGCGTTCTT GGCGGTCAAC CGCAACAAGC GCAGCGTGGC GGTCGACCTG CGCGCCGAGG CGGGGGTCGA GGTGGTGCGG CGGCTGGTCG CGGTCAGCGA CGTGGTCGTG GAGAACTTCC GGCCCGGCAA GGCCGAGCAG ATGGGGCTGG GCTACGAGCA GCTGCGCGAG CTCAACCCGG GGCTGGTCTA CTGCTCGATC TCGGGGTGGG GCAGCGACGG GCCCTACGCC GCGCGGGGTG GGTACGCCTC GACCGCCGAG GCCGCCGGCG GGCTGATGAG CGTCACCGGC GAGCGCGGCC GGGGCCCGGT CAAGGTCGGG GTCTCCATCG TGGACTCCCT GACCGGCCTG TACGCCAAGG ACGCCATCAC CGCCGCCCTC CTGGCCCGCG TCCGCACCGG CGTGGGCCAG AAGGTCGAGA CCTCACTGCT GGAGTCGACC GTCTCCATCC TGTCGATGTC GGCCTACGCC TACCTCCTCG GCGGCGTCGT CGCCGGCCGC TGGGGCTCCG AGCACCAGTG GCACGTCCCC TGGAAGGCCT TCCCCACCGT CGACGGGTTC CTGGTCATCG CCACCAACAA CCAGGAGCAG TGGCGCAAGA TCTGCGTGGG CATCGAGCGG CCCGACCTGC TCGAGGACCC CCGGTTCACC ACCATGGCCG ACCGCGCCGC GCACCGCGAG ATCCTCTACG CCCTCCTCGA CGAGGTCTTC GCCACCCGCA CCACCCACGA CTGGGTCGCG CGCCTGGACG CCGTCGGCGC CGCCGCCGCC CCCGTCAACA CCATCGACCA GGTCTTCGCC GACCCCCAGG TCCTGGCCCG CGACATGCTC CAGAGCGTCG AACACCCCAC CCTGGGCCCG ATCGCCCAGG TCGGCCACGC CCAGAAGCTC CACGGCACCC CCCACCAGAT CACCCTCCCC CCGCCCCTGC TCGGCCAGCA CACCCGCGAG GTCCTCACCG ACCTCGGCGG CTACACCCCC GACGAGATCG ACGAGCTCAT CAGCGGTCGA GTAATTCCTG CAAACTGTTG A
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Protein sequence | MDERPGELLP LSGVRVVDLT RALSGPFCTM LLGDQGAEVV KIERPVVGDD TRRQSNPMVG TENSAFLAVN RNKRSVAVDL RAEAGVEVVR RLVAVSDVVV ENFRPGKAEQ MGLGYEQLRE LNPGLVYCSI SGWGSDGPYA ARGGYASTAE AAGGLMSVTG ERGRGPVKVG VSIVDSLTGL YAKDAITAAL LARVRTGVGQ KVETSLLEST VSILSMSAYA YLLGGVVAGR WGSEHQWHVP WKAFPTVDGF LVIATNNQEQ WRKICVGIER PDLLEDPRFT TMADRAAHRE ILYALLDEVF ATRTTHDWVA RLDAVGAAAA PVNTIDQVFA DPQVLARDML QSVEHPTLGP IAQVGHAQKL HGTPHQITLP PPLLGQHTRE VLTDLGGYTP DEIDELISGR VIPANC
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