Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0036 |
Symbol | |
ID | 4598390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 39830 |
End bp | 41461 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774651 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_921273 |
Protein GI | 119714308 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCATG TAGGCGACGC GATGATCGAC GCGATCGCGA GCGCAGGCGT CCGACGGCTC TACACCGTGC CCGGCGAGAG CTTCTTGGAG GTGCTCGACG CCGCCGACCG GCACCCCGCG CTCCGCCAGT TCTCCACCCG GCACGAGTCG GGCGCCTCGT TCATGGCCGA CGCGGACGCC AAGACGTCCG GCGTGCCCGC CGTCGCGATG GCCACCCGGG GTCCGGGCGC GGCGAACCTC AGCATCGGCG TGCACACCGC TCACCAGGAC GGCACGCCCA TGCTGGTTCT GATCGGGGAC GTGGAGACGC CGCGGATCTT CCGCGGCGCC TTCCAGGAGG TCGATCTGCC GGCGTTCTAC CGGCCGATCA CCAAGGCGGC CATGACCGCC CGCCGCGGGG ACCGGCTGCC CGAGATGGTG ACCGACGCGC TCCGGATCGC AGTCTCCGGA CGCCCCGGCC CGGTCATGAT CTCGCTGCCC GCCGACCTGC TCGCGGAAGA GTTCACCGGG CCTGCGCCGG CGCCGCTCGC GCCCGTCGCG CCCGCCGGAT GTCCCCCCGA GACCGTCCGC CGGCTGCGGA GCACCCTGGA ACGGGCGCAG CGACCGGTGG TCATCGCCGG CGCGGGCGTT CGCCACGCCA CCGACCGCCT CGTCGCGCTC TGCGAGGCCT ACGGTCTCGG CGTGTACGCC GCGATGCGAC GGCAGGACGT CTTCCCCAAC GACCACCCGC TCTACCTCGG CCACCTCGGT GTCTCGCCCG CGCCCGGCAC CGTGGACGCG CTCCGCGAGG CCGACGTGGT GCTGATCCTC GGCGCTGCGC TGGACCAGAT GACGACCCAG CAGTTCACGC TGCCCGCCGC CTCGGCGCAC CGGATCCACG TCGACGCCGA TCCGCTCACC CTCGGCGCCG GCCTGCCCGT CGACGAGGCT GTCGTCGCCG AGCCGCGCGA GCTGATCGAG GCGCTGCTAG CCGAACCGCC CACCGCGCCG CACCGGGCCT GGGACGCCGC GCACCGACGG TTCCTGGAGT CGACATGCGC CCCCCCGCGC ACCCCGGCCC GGGGCTGCGA CCCCGGTGCT GTGATCGAGG CCATGAAGCG CGCGTGGCCC GCCGACACGA TCGTCACCAG CGACGCGGGC AACTTCTCGG GATTCCTCCA CCAGTACTGG CGGTTCACGA CCCCCCGCAG CCAGGCCGCG CCCATCAACG GCGCGATGGG CTATGCCGTG CCAGGCGCCG TCGGCGCCAA GGCTGCCTCC CCCGACCGGC ACGTGCTCGG CGTGGTCGGC GACGGTGGCT TCCTGATGAC CGGCAGCGAG GTCGAGACCG CCGTGCGCTA CGGCCTGCCG CTGACGATCG TCGTCCTGCG CAACGGGCTC TACGGCACGA TCGCGATGCA CCAGGCCCAG GAGATGGGCC GCCTGTCGGC CGTCGACATC GGCGACGTGG ACCTCGCGGC ATACGGCCGC AGCCTCGGCG CGGAGGGCAT CACGGTCGAG GAGCCGGGTC AGCTCGACGA GGCCATGCGC ACTGCCGCGA CCAGCGATGC GGTCACCGTC GTCGACGTCG TCACCGACCC GGACCTCATC ACCGCGTCCG GCCGGCTCTC GGAGATGTTC CAGACCTCCT GA
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Protein sequence | MPHVGDAMID AIASAGVRRL YTVPGESFLE VLDAADRHPA LRQFSTRHES GASFMADADA KTSGVPAVAM ATRGPGAANL SIGVHTAHQD GTPMLVLIGD VETPRIFRGA FQEVDLPAFY RPITKAAMTA RRGDRLPEMV TDALRIAVSG RPGPVMISLP ADLLAEEFTG PAPAPLAPVA PAGCPPETVR RLRSTLERAQ RPVVIAGAGV RHATDRLVAL CEAYGLGVYA AMRRQDVFPN DHPLYLGHLG VSPAPGTVDA LREADVVLIL GAALDQMTTQ QFTLPAASAH RIHVDADPLT LGAGLPVDEA VVAEPRELIE ALLAEPPTAP HRAWDAAHRR FLESTCAPPR TPARGCDPGA VIEAMKRAWP ADTIVTSDAG NFSGFLHQYW RFTTPRSQAA PINGAMGYAV PGAVGAKAAS PDRHVLGVVG DGGFLMTGSE VETAVRYGLP LTIVVLRNGL YGTIAMHQAQ EMGRLSAVDI GDVDLAAYGR SLGAEGITVE EPGQLDEAMR TAATSDAVTV VDVVTDPDLI TASGRLSEMF QTS
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