| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0030 |
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| Symbol | |
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| ID | 4598384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 33397 |
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| End bp | 34605 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639774645 |
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| Product | major facilitator transporter |
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| Protein accession | YP_921267 |
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| Protein GI | 119714302 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.63894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGG GCTCCCGCGC GGTGCTGCCG CGACCCACCG GCGGCTTCGA CCGCGCATCG
ATGAGCGCCT CCCTGGCCGG GGTGGCGCTC AGCGTGCTTC CCGTCTACCT CCTCGGCGGA
CTCACGGTCT TCATCGCCGA CGACCTCGAC TACGGGGTGG TCGGACTCGG GGCGGCGGCC
TCGGCGTTCT ACGCGGCCTC CGCGGTCGCC TCGATCCCGG CCGGCCGAGT CGCCCACCGG
CTGGGAGCCG AGCGGTCCTT GATCCTCGGC GTGTGCGTGT CGTCCGCGGC GCTGCTCGCG
GTCGCCCTGG TCGTGCAGGC CTGGTGGAGT CTGTGTGTGG CCCTGGTCGT CGGCGGCGTG
GCGACCGCGC TCGTCCAGCC GGCCGCCAGT GCGCTCGTGG CACGGGACCA GCCCGACAGC
CGCCACGGCC TGAGCTTCGG CCTGCTCCAG ACGGCCGTCC CGGTGGCCAC CCTCGCTGCC
GGACTGGCGG TGCCGGTGAT CGGGGCCACG TGGGGCTGGC GATGGGCCTA CGGCCTCCTG
GCGCTGGGCG CCATCCCGAT CGTCGCGTTC GGGCTGCGCC GGGCACCGCG CCGTCTGGAG
CGGCGAGCCA ACCCTCCGAG CGCGTCCCGG CCGATCCGCG GCGCCGCGAT CGTCCTGCTC
ACGCTCGCCG GCGCCTGCGC GGCCGCGCCC GCGAACGCCC TCGGCGCCTA CTACGTCGAG
TCCGCGGTCG CCGCCGGCAT CTCCCGGTCC GGCGCGGGTC TGTGGCTGGT GGCCGGCAGC
GCCGTGGGTA TCGGGGCGCG CCTGCTGTGG GGTTGGATGA TCGACCGCAG GGGGGCCGAC
CCGCGCCTGT GGATCGCGGG CCTGATGCTC AGCGGAGGCG TCGGCTTCGC GCTGCTCAGC
GTGACCCACA CCGCTCCCGT CCTGTTCGCC GCCACCGCGC TGACCTTCGG GGCCGGGTGG
GCGTGGAAGG GTCTGTACAA CCTCGCGGCG ATCCGGCACG ACCCCGAGCA GCCGAGCGCG
GCCGTCGGCA TCGCGCAGTT CGGGGTCTAC GTCGGGAGCG TCCTGGGCCC GATCGCTTTC
GGCGTCCTCC TGGCGCACAG CTCCTACGCC GTGGCCTGGG CGGCCGCCGG GGTCACCTGC
CTGCTGACCC CGGTGCTCAT CTGGGTCCAG CGCCGGCTCG GTCGGCCGGC CGCCGGGCAC
GGTATCTGA
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| Protein sequence | MAEGSRAVLP RPTGGFDRAS MSASLAGVAL SVLPVYLLGG LTVFIADDLD YGVVGLGAAA
SAFYAASAVA SIPAGRVAHR LGAERSLILG VCVSSAALLA VALVVQAWWS LCVALVVGGV
ATALVQPAAS ALVARDQPDS RHGLSFGLLQ TAVPVATLAA GLAVPVIGAT WGWRWAYGLL
ALGAIPIVAF GLRRAPRRLE RRANPPSASR PIRGAAIVLL TLAGACAAAP ANALGAYYVE
SAVAAGISRS GAGLWLVAGS AVGIGARLLW GWMIDRRGAD PRLWIAGLML SGGVGFALLS
VTHTAPVLFA ATALTFGAGW AWKGLYNLAA IRHDPEQPSA AVGIAQFGVY VGSVLGPIAF
GVLLAHSSYA VAWAAAGVTC LLTPVLIWVQ RRLGRPAAGH GI
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