Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0026 |
Symbol | |
ID | 4598379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 29771 |
End bp | 31087 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639774640 |
Product | protein phosphatase 2C domain-containing protein |
Protein accession | YP_921263 |
Protein GI | 119714298 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.887791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA CGCCAGCAGC GGCGCCGAGC CTGCGCCTGC GGTTCGCCGC GATCTCCGAC GTCGGGCGGG TCCGCAAGGA CAACCAGGAC TCCGGGTACG TCGGCCCGTG GCTGGTCGCG GTCTGCGACG GCGTCGGCGG CGCGGCCCGC GGTGACATCG CCTCCAGCAC CGCGATCGCC CAGCTGCGGC GGCTCGACGT GTCCCCGAGC GGCGAGTCCG CCGACGACCT GCTCACCAAG GTCGCCGGCG CCCTGCACCG GGCCCACGAG CGGATCAACG AGCTCGCCGC CGAGGACCCC GCACTCGACG GCACCAGCAC CACCGCGACG GTCGCGCTCT TCGACGGCGC GCGGGTCGCG ATGGGCCACG TCGGCGACAG CCGGGCCTAC CTGTTCCGCG ACGGCGAGAT CACCCGGCTC ACCTCCGACC ACACCTTCGT GCAGACCCTG ATCGACGAGG GCCGGATCAC CGAGGCCGAG GCCCGGGTCC ACCCGCACCG CAACCTGATC CTCAACGCCC TGGGTGGTCC CGGCGACGTC GAGCCCGACC TCTTCATGAT CGAGCTGGCG CCGAAGGACC GGCTGCTGCT GTGCAGCGAC GGCGCCAGCG GGGTCCTCGA CGACGACCGG CTGGCCGACA TCCTCGCCAC CGGGAGCCCG GAGTTCGCCT CGGTCGAGCT GGTCCGCGCC AGCCTCGAGG CCGGCAGCTC CGACAACGTC ACCTGCCTGG TCGCCGACGC CGTCGACGCC GCCGAGCCGC CCGGCCCCGG CGAGGCGGAG GAGCCGGTGC TGGTCGGCGC GGCCGCCGAG CGGCGCCTGC ACCGCCAGCG CGGCGGCATG GGCAGCCTGT TCCGCGGCCA CCGGTCGGGC GACACCGGCG AGCTCGAGCC GGTGCAGGCC GAGATCCTCG ACCTGCCCTA CGCGATCACC GCCGACCCGA TCGACCCGGA GGAGGCGCGC TACGCGCCGC GCCCGCCGCG CCGCTTCGTG TGGCTCAAGC GGCTGCTGAC GCTCGTGCTC CTGGTCGGCC TCGCCTGGGT CGGCATCGCC GCCGCCTGGT CGTGGACCCA GGGGCAGTAC TACGTCGGCG AGCAGGACGG CACGGTCGTC ATCTTCCGCG GCGTCAACAC CGAGCTGGCC GGCCTCTCGC TCTCCGAGCC CTATGAGAGC TCGGACGTCG AGCTGGACCG GCTCGGCGAG GTCGAGGCCG ACCGGGTCCG CGAGGGCATC GCCTACGACA ATCTCGAGGA CGCCGAGCAG AAGGTCCGCG ACCTCGCCGC CCGGCAGTCC CCCGCCTCCG AGAGCTCGGC CGGCTGA
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Protein sequence | MTDTPAAAPS LRLRFAAISD VGRVRKDNQD SGYVGPWLVA VCDGVGGAAR GDIASSTAIA QLRRLDVSPS GESADDLLTK VAGALHRAHE RINELAAEDP ALDGTSTTAT VALFDGARVA MGHVGDSRAY LFRDGEITRL TSDHTFVQTL IDEGRITEAE ARVHPHRNLI LNALGGPGDV EPDLFMIELA PKDRLLLCSD GASGVLDDDR LADILATGSP EFASVELVRA SLEAGSSDNV TCLVADAVDA AEPPGPGEAE EPVLVGAAAE RRLHRQRGGM GSLFRGHRSG DTGELEPVQA EILDLPYAIT ADPIDPEEAR YAPRPPRRFV WLKRLLTLVL LVGLAWVGIA AAWSWTQGQY YVGEQDGTVV IFRGVNTELA GLSLSEPYES SDVELDRLGE VEADRVREGI AYDNLEDAEQ KVRDLAARQS PASESSAG
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