Gene Noca_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0026 
Symbol 
ID4598379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp29771 
End bp31087 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content74% 
IMG OID639774640 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_921263 
Protein GI119714298 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.887791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CGCCAGCAGC GGCGCCGAGC CTGCGCCTGC GGTTCGCCGC GATCTCCGAC 
GTCGGGCGGG TCCGCAAGGA CAACCAGGAC TCCGGGTACG TCGGCCCGTG GCTGGTCGCG
GTCTGCGACG GCGTCGGCGG CGCGGCCCGC GGTGACATCG CCTCCAGCAC CGCGATCGCC
CAGCTGCGGC GGCTCGACGT GTCCCCGAGC GGCGAGTCCG CCGACGACCT GCTCACCAAG
GTCGCCGGCG CCCTGCACCG GGCCCACGAG CGGATCAACG AGCTCGCCGC CGAGGACCCC
GCACTCGACG GCACCAGCAC CACCGCGACG GTCGCGCTCT TCGACGGCGC GCGGGTCGCG
ATGGGCCACG TCGGCGACAG CCGGGCCTAC CTGTTCCGCG ACGGCGAGAT CACCCGGCTC
ACCTCCGACC ACACCTTCGT GCAGACCCTG ATCGACGAGG GCCGGATCAC CGAGGCCGAG
GCCCGGGTCC ACCCGCACCG CAACCTGATC CTCAACGCCC TGGGTGGTCC CGGCGACGTC
GAGCCCGACC TCTTCATGAT CGAGCTGGCG CCGAAGGACC GGCTGCTGCT GTGCAGCGAC
GGCGCCAGCG GGGTCCTCGA CGACGACCGG CTGGCCGACA TCCTCGCCAC CGGGAGCCCG
GAGTTCGCCT CGGTCGAGCT GGTCCGCGCC AGCCTCGAGG CCGGCAGCTC CGACAACGTC
ACCTGCCTGG TCGCCGACGC CGTCGACGCC GCCGAGCCGC CCGGCCCCGG CGAGGCGGAG
GAGCCGGTGC TGGTCGGCGC GGCCGCCGAG CGGCGCCTGC ACCGCCAGCG CGGCGGCATG
GGCAGCCTGT TCCGCGGCCA CCGGTCGGGC GACACCGGCG AGCTCGAGCC GGTGCAGGCC
GAGATCCTCG ACCTGCCCTA CGCGATCACC GCCGACCCGA TCGACCCGGA GGAGGCGCGC
TACGCGCCGC GCCCGCCGCG CCGCTTCGTG TGGCTCAAGC GGCTGCTGAC GCTCGTGCTC
CTGGTCGGCC TCGCCTGGGT CGGCATCGCC GCCGCCTGGT CGTGGACCCA GGGGCAGTAC
TACGTCGGCG AGCAGGACGG CACGGTCGTC ATCTTCCGCG GCGTCAACAC CGAGCTGGCC
GGCCTCTCGC TCTCCGAGCC CTATGAGAGC TCGGACGTCG AGCTGGACCG GCTCGGCGAG
GTCGAGGCCG ACCGGGTCCG CGAGGGCATC GCCTACGACA ATCTCGAGGA CGCCGAGCAG
AAGGTCCGCG ACCTCGCCGC CCGGCAGTCC CCCGCCTCCG AGAGCTCGGC CGGCTGA
 
Protein sequence
MTDTPAAAPS LRLRFAAISD VGRVRKDNQD SGYVGPWLVA VCDGVGGAAR GDIASSTAIA 
QLRRLDVSPS GESADDLLTK VAGALHRAHE RINELAAEDP ALDGTSTTAT VALFDGARVA
MGHVGDSRAY LFRDGEITRL TSDHTFVQTL IDEGRITEAE ARVHPHRNLI LNALGGPGDV
EPDLFMIELA PKDRLLLCSD GASGVLDDDR LADILATGSP EFASVELVRA SLEAGSSDNV
TCLVADAVDA AEPPGPGEAE EPVLVGAAAE RRLHRQRGGM GSLFRGHRSG DTGELEPVQA
EILDLPYAIT ADPIDPEEAR YAPRPPRRFV WLKRLLTLVL LVGLAWVGIA AAWSWTQGQY
YVGEQDGTVV IFRGVNTELA GLSLSEPYES SDVELDRLGE VEADRVREGI AYDNLEDAEQ
KVRDLAARQS PASESSAG