Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3063 |
Symbol | |
ID | 3704479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 3452086 |
End bp | 3453492 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637739537 |
Product | amino acid permease-associated region |
Protein accession | YP_345034 |
Protein GI | 77166509 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.313511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGT TTCGAACTAA GCCCATCGAA ACGGATCTAG CTAAGGATAC CGGCCTTAGA AAAGTGCTGG GAGCGTTTGA TCTGGTCTTA CTTGGCATTG GCGCCATTAT CGGCGCTGGT ATTTTTGTGC TGACGGGTAT TGCCGCAGCG AATTATGCTG GACCTGCCGT GGTCTTATCT TTTGTGGTAG CGGGAATGGC AGTTACTTTG GCTGCCCTTT CCTACGCAGA ACTAGCTGCC TTTATCGGCG GTGCTGGCAG CGCCTATGGA TATGGCTATG CCGGTTTAGG TGAATTTGTG GCTTGGGTCA TTGGCTGGAT GCTGATTCTG GAATATACCG TTGCAATATC TGCGGTATCA GTGGGCTGGT CAGGTTATGT TGGCAATGCA TTGGCAGCAA TGCAAATGCA TCTGCCCGAC GTGCTGACAC AAACGCCTTC TCAGGGTGGC TGGGTCAATC TGCCAGCAAT GCTCATCATT CTTATCCTCG GAATTCTTCT TGCTACTGGT GCTAAGGTAA GCGCCCACTT CAACGCTATC ATGGTATTTG TTAAAGTTGC CGCCATACTG CTATTCATTG GTGTTGCCTT CTTCCATGTA GATACTAATC ACTGGACTCC CTTTATGCCC TTTGGTTGGC AGGGAGTCAT GACCGGCGCA GCCAGTATTT TTTTTGCTTA TATCGGCTTT GATGCTGTCT CCACGGCAGC TGAGGAGACC CGGAATCCAC AAAAGGATCT GCCCATTGGA ATCCTAGGAT CTCTCGCTAT TTGCACGTTG CTTTATATGC TAGTGGCTGC GTTATTAACC GGCATTGTAC CTTACTCCTC CCTAGATGTT CCCTCCCCGG TTTCTGAAGC CCTCCTCCAG GTAGGTGCGA AGTGGGCCTC CGGGATGATT GCTATCGGCG CTATTGCCGG CCTTACTACC GTCATGTTGG TCCTGTATTT TGGGCTGACC CGGATTCTAT TTGCTATTTC ACGGGACGGC TTATTGCCGC CCTTTTTTTC TCATATAAAC AATAGGACCG GTAGCCCCGT ACGTGTGATT CTGCTATCTG GTTTAGCAAT GGCAAGCATT GCAGGCTTCG CTCCCCTAAA TGATATTGTC GAGCTTACCA ATATTGGCAC ACTCGGTGCC TTCACAGTAG TTTGTGCTGG AGTCGCTGTA TTACGCTACA CTAGACCGGA GTTACACCGA CCGTTCCGAA TTCCATTTAG TCCTGCCGTC CCGCTGCTAG GAATAGCCTT CTGCGTGTAT TTGATGACCC AGTTGAGCGC AGATACTTGG ACTCGGTTTT CAGTATGGCT GGCAGCAGGG CTAGTCATTT ACTTTACTTA CTCCTACCGC CACAGTAAAC TCTCTGCCCC GGAGGAAAGC AAACCAGCCC ATGCGCCGCT TGAGTAA
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Protein sequence | MKLFRTKPIE TDLAKDTGLR KVLGAFDLVL LGIGAIIGAG IFVLTGIAAA NYAGPAVVLS FVVAGMAVTL AALSYAELAA FIGGAGSAYG YGYAGLGEFV AWVIGWMLIL EYTVAISAVS VGWSGYVGNA LAAMQMHLPD VLTQTPSQGG WVNLPAMLII LILGILLATG AKVSAHFNAI MVFVKVAAIL LFIGVAFFHV DTNHWTPFMP FGWQGVMTGA ASIFFAYIGF DAVSTAAEET RNPQKDLPIG ILGSLAICTL LYMLVAALLT GIVPYSSLDV PSPVSEALLQ VGAKWASGMI AIGAIAGLTT VMLVLYFGLT RILFAISRDG LLPPFFSHIN NRTGSPVRVI LLSGLAMASI AGFAPLNDIV ELTNIGTLGA FTVVCAGVAV LRYTRPELHR PFRIPFSPAV PLLGIAFCVY LMTQLSADTW TRFSVWLAAG LVIYFTYSYR HSKLSAPEES KPAHAPLE
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