Gene Noc_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2977 
Symbol 
ID3707456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3363760 
End bp3364185 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID637739451 
Productanti-sigma regulatory factor (Ser/Thr protein kinase 
Protein accessionYP_344949 
Protein GI77166424 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTAACG GAGATATTCA ACTAGAAATT AGGATTCCCA ATAAAACCTG TTATCTTGGT 
TTTATTGGAG AAATCGGCGA AAAAGTCGCT AACGAGCTAG CTCGCTATAC CGGTGACCGC
ACGGCGCTCG CCTACCATCT AAACTTGGCT CTTACCGAAG CCTTAGTCAA TGCGATTGAG
CACGGAAACA CAGATGATCC GGATCAAACC GTCCGGGTAT CAATTCAAGT TTTACCTGAT
CAATTATGCA TTGAGGTCTA CGATCATGGA CAAGGCTTTG ATCTGGACCA GGTGGGGGCA
CCCGACCTAG AATATCCTAG GGAACGAGGA CGGGGCATTT TTTTAATCAA GTCTATTATG
GATTCAGTAA ATTACCAGAA AATTAACGGT GGCAATGTAT TAGAAATGAG GAAAAAACTC
GATTGA
 
Protein sequence
MCNGDIQLEI RIPNKTCYLG FIGEIGEKVA NELARYTGDR TALAYHLNLA LTEALVNAIE 
HGNTDDPDQT VRVSIQVLPD QLCIEVYDHG QGFDLDQVGA PDLEYPRERG RGIFLIKSIM
DSVNYQKING GNVLEMRKKL D