| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2863 |
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| Symbol | murD |
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| ID | 3705404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3242179 |
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| End bp | 3243540 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637739339 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_344839 |
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| Protein GI | 77166314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.871617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGAATG AACCCCTACA GCCCCAAGTG GCGGCAACTA GCGTGATTCT TGGTCTCGGC
AAAACCGGAC TATCTAGTGC CCGCTTCCTA GCTAGCCGCG GCTTCTCGAT AGCAGTCATG
GACAGTCGTA AGTCCCCGCC AGGACTGGCT GCCCTCCAGG AGCAAAATCC TGATGCGGTG
CTCCGGCTGG GTGGTTTTGA TGCTGCCCTG ATAGCGGAGG CCGAACAATT GGTCGTCAGT
CCTGGCGTAG CCTTGAGTGA GCCAGCAATC CTGGCAGCTC GGGCAAGAGG AATACCTGTG
GTAGGGGATA TTGAATTATT TGCTTCCTAT GTCAAGGCGC CCGTGATAGG GATCACCGGC
TCTAATGGTA AAAGCACTGT GACCTCGCTT CTTGAAGCGA TGGCGCGCCA GGCAGGCAGG
CAGGTACTCG CGGGTGGCAA TTTGGGAACC CCCGCCTTGG AATTGCTAGA AAAGCCGGTG
CCGGATCTTT ATATCCTGGA ATTATCCAGC TTTCAATTGG AAACTACGTA TACCCTAGAT
GCCGTTGCTG CTTGCGTCCT TAATATCAGT CCCGATCATA TGGATCGATA CCCCGATCTA
GATGCCTATT GTCAGGCGAA AGCCAGAATT TACCGGGGGA CTGGGACGAT GGTTATTAAC
GCCGATGATT TTCGTGTGGC AAGCCTCGTC CAACCCCATC GGCCTTGCCT TCGATTTACC
TTGGGGATGC CGGCTGTTGA TGAATACGGC TTACAAGAGC GGGCCGGTGA AACTTGGCTG
GTCCGCGGCC ATGAGCGGCT GCTATCGGCT CGGCGGTTAC CTTTAGCTGG GCGCCATAAT
CTAGCCAATG CCTTGGCCGC GCTGGCGCTG GGGGAGGCCG TGGGATTGCC TCGCGCTGCG
ATGTTGTCGG CTTTACAGGC ATTCTCCGGT TTACCTCACC GTTGCGAGTG GTTGGCAGAG
GTAAACGGGG TGCGCTGGTA CAACGACTCC AAAGGAACCA ATGTAGGTGC CACGGTAGCT
GCGATTGAAG GAATTCCCTG CCAAGGCAAG CTGATACTTA TTGCAGGAGG TGTCGGCAAG
GGCGCGGATT TTTCTCCTTT ATCCAAGCCT TTGATCCAGC GGGCCAGGGC AGTTGTCTTG
ATGGGTCAAG ATGCTTCCCG GTTGGAAGCG GTGTTAGCCA GTGGCCCCCC CCTCTATCGG
GTTAATAGCA TGGATGAGGC GGTGGTTAAA GCGAATGTCT TGGCCCAATC TGGTGATTGC
GTCCTGTTAT CGCCTGCCTG CGCTAGCTTC GATATGTATG CTGATTTTGA AGCTCGCGGT
CAAGCGTTTA GGCAAGCTGT ACGGGAGATC TTGTCATGTT GA
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| Protein sequence | MLNEPLQPQV AATSVILGLG KTGLSSARFL ASRGFSIAVM DSRKSPPGLA ALQEQNPDAV
LRLGGFDAAL IAEAEQLVVS PGVALSEPAI LAARARGIPV VGDIELFASY VKAPVIGITG
SNGKSTVTSL LEAMARQAGR QVLAGGNLGT PALELLEKPV PDLYILELSS FQLETTYTLD
AVAACVLNIS PDHMDRYPDL DAYCQAKARI YRGTGTMVIN ADDFRVASLV QPHRPCLRFT
LGMPAVDEYG LQERAGETWL VRGHERLLSA RRLPLAGRHN LANALAALAL GEAVGLPRAA
MLSALQAFSG LPHRCEWLAE VNGVRWYNDS KGTNVGATVA AIEGIPCQGK LILIAGGVGK
GADFSPLSKP LIQRARAVVL MGQDASRLEA VLASGPPLYR VNSMDEAVVK ANVLAQSGDC
VLLSPACASF DMYADFEARG QAFRQAVREI LSC
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