Gene Noc_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2814 
Symbol 
ID3705563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3190804 
End bp3191535 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID637739290 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_344791 
Protein GI77166266 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCAGA TTATACTCGA TACCGAGACC ACTGGATTGG AACCTAAAGA GGGGCACCGA 
ATCATTGAGA TTGGCGGTGT TGAACTGAGC TGCCGACGCC GCACGGGACG AACTTTTCAT
TGTTATCTAA ACCCGGAACG GGAGGTAGAT AAAGGAGCGT TGAAAATCCA TGGCCTGAGC
AATGAATTTC TGTCCGATAA ACCCCGTTTT ATAGAGATTG CCGAAGAATT TTTAGCGTTT
ATTGAAGGGG CAGAGTTGGT GATTCATAAT GCCCCTTTCG ATGTTGGTTT TTTGGATCAT
GAGTTGTGTT TGCTCGGTTC TAAATGGGGG AAAATAAGCA CTGATTGCCA AGTGTTGGAC
ACATTGCAGC TAGCGCGGCA GCGTCATCCC GGCCAAAAAA ATAACTTAGA TGCTCTTTGC
AAGCGCTATG GGATCGACAA CTCTCGTCGG GATCTGCATG GTGCTCTCCT CGATGCGGAA
ATCCTGGCCG GAGTATATTT AGCCATGACG GGTGGCCAGG TCAGTTTAAG TCTGCACGAG
TATGGTGACA ATGGCCTTCC ATTTCGTGTA GGAGGGGGGA ATTATCGGCC TGTTTCTGCC
GAGCGAGCGT CACTTACGAT AGCGCGGGCA AGCAGAGAGG AACGGATGGC TCATGACGCT
CGTCTTACGG CTATTGATAA GGCAAGTGGC GGCGCTTGTT TGTGGCGCCA GCTTGATTCG
TCGCCAGATT AA
 
Protein sequence
MRQIILDTET TGLEPKEGHR IIEIGGVELS CRRRTGRTFH CYLNPEREVD KGALKIHGLS 
NEFLSDKPRF IEIAEEFLAF IEGAELVIHN APFDVGFLDH ELCLLGSKWG KISTDCQVLD
TLQLARQRHP GQKNNLDALC KRYGIDNSRR DLHGALLDAE ILAGVYLAMT GGQVSLSLHE
YGDNGLPFRV GGGNYRPVSA ERASLTIARA SREERMAHDA RLTAIDKASG GACLWRQLDS
SPD