Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2806 |
Symbol | pgk |
ID | 3705286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3179934 |
End bp | 3181112 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637739282 |
Product | phosphoglycerate kinase |
Protein accession | YP_344783 |
Protein GI | 77166258 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.19528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTATTT TAAAGATGTC CGAGCTGGAT CTTGCCGGGA AGCGCGTTCT TATCCGTGAA GACCTTAATG TACCCTTGAA AAATGGTGAG ATTACCGATG ATACCCGTAT CCGGGCATCG TTGCCCTCGA TTCAACAGGC GATGCAGGCG GGGGCTAAGG TCATGGTGAT GTCCCACCTT GGCCGTCCTA CCGAAGGGGA ATTCGATGCT GCTTTTTCTC TGGCTCCAGT AGCGGGATAT TTATCTCACC TATTAGGACA GGAAGTTCGT TTGGCTCCGG ATTGGCTGGA GGGGATGGCG GTTGAGAAGG GTCAGCTCGT GTTATGCGAA AATGTCCGGT TTAACCGGGG AGAGAAAAAG AACGATGAGG CTCTAGCCAA AAAGATGGCG GCCCTTTGTG ATATTTATGT GATGGATGCC TTTGGCAGCG CCCACCGGGC TCAAGCCTCA ACCCATGGGG TGGCAAAGTA TGCCCCAGTT GCCTGCGCGG GACCTTTACT GGCGGGGGAA CTAGAGGCTT TAGGTAAGGC TTTGGAAAAT CCTGCCCGGC CTTTAGTGGC TATTGTGGGC GGTTCCAAGG TCTCCACCAA ATTAACCGTA CTGGAAAGCC TATCCCAGGT GGTGGATCAG TTGATTGTAG GTGGCGGCAT CGCTAATACC TTTATTGCAG CCGCGGATTA CAATGTGGGT AAATCTCTTT ATGAAGCGGA TTTAGTTGGG ACTGCCAAGC AACTTAGAAC CGCGGCGCAG GAAGGAGGAG GGGATATCCC ACTGCCGGTG GATGTGGTTT GCGGTCAGGA ATTTTCCGAG AACGCAGAGG CCGTCCTTAA GCGGATAGGC AAGGTTACGG ATGAAGACAT GATTTTTGAT ATCGGGCCTG AGACTTCGAA GCATTTTGCA GAAATATTGA AGGGTGCGGG GACCATCGTC TGGAATGGCC CGGTGGGCGT ATTTGAGTTC GATCAATTCG GGGAAGGCAC CAAGGCTCTG GCATTGGCAA TTGCTGAAAG CCCCGCCTTT TCCATCGCGG GTGGCGGCGA TACTTTAGCA GCTGTAGCAA AATATGGAGT GGGCGATCAG GTCTCTTATA TTTCCACGGG TGGAGGGGCT TTTTTGGAGT TTCTGGAGGG AAAGCAACTG CCCGCGGTTG CTATTCTTGA AGAACGGGCC AGCCAATAA
|
Protein sequence | MPILKMSELD LAGKRVLIRE DLNVPLKNGE ITDDTRIRAS LPSIQQAMQA GAKVMVMSHL GRPTEGEFDA AFSLAPVAGY LSHLLGQEVR LAPDWLEGMA VEKGQLVLCE NVRFNRGEKK NDEALAKKMA ALCDIYVMDA FGSAHRAQAS THGVAKYAPV ACAGPLLAGE LEALGKALEN PARPLVAIVG GSKVSTKLTV LESLSQVVDQ LIVGGGIANT FIAAADYNVG KSLYEADLVG TAKQLRTAAQ EGGGDIPLPV DVVCGQEFSE NAEAVLKRIG KVTDEDMIFD IGPETSKHFA EILKGAGTIV WNGPVGVFEF DQFGEGTKAL ALAIAESPAF SIAGGGDTLA AVAKYGVGDQ VSYISTGGGA FLEFLEGKQL PAVAILEERA SQ
|
| |