| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2773 |
|---|
| Symbol | |
|---|
| ID | 3705503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3147653 |
|---|
| End bp | 3149329 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637739249 |
|---|
| Product | ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_344750 |
|---|
| Protein GI | 77166225 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTACTCC AAGTCGAAAA TCTGAAAACT TACCTCCAAG CCGGCGGCGA AACCGTTAAG
GCGGTGGATG GAATAAGTTT TACCATTGAA CGGGGCGAAA CCTTCTGTTT GGTTGGGGAG
TCGGGCAGCG GCAAATCGGT CACCGCCCTG TCAGTGATCC AGTTATTGCC CAGGGACATT
AGCCACCATC CTGAAGGGCG CATCTTGCTC GATTGGCGGC AGGATAAACA GCGCCATGAG
CCGGTGGATC TGCTGCGCCT GCCAGAGACC CGCAAGCAAA AGATCCGCGG CGCCCGCATC
GCCATGATTT TCCAGGAGCC CATGACCTCC CTCAACCCCG TTTTCACGGT GGGCGAGCAA
ATCATAGAGA CTTTGCAACT CCACTTCCCC GGTATGGAGG AGACGGAGGC GCGGGAACGG
GCCGTGGCCG CCTTGGCCCA GGTGCAAATT TCAAATCCAG AACTCCGCAT TGACGAGTAT
CCCCATCGGC TCTCTGGCGG CCAGCGCCAG CGGGTCATGA TTGCCATGGC CATGGCCTGC
GAACCGGACC TACTCATTGC CGATGAACCC ACCACGGCCT TGGATGTCAC CGTGCAGGCT
GAAATTCTGC GCTTGATGCG TGAGCTACAA ACACGGCGAA ATATGGGTAT CCTATTTATT
ACCCACGACT TTGGGGTGGT CTCCCAGATG GCTCGCCGAT TGGCGGTGAT GCGGTTAGGG
AAAATCGTCG AGTCAGGTAC TCTGGATGAG ATTCTGTACC GCCCCCAGCA TCCCTACACC
TGCCAGCTCC TCGCTGCCCT GCCCGAGAAT CTTAAGCGGC GCCAACGAAC CTCGGCAAGG
GAGAGCGGCA TAGATGCGCC GCCCTCCTAT ACCGGCACTA AGCAACCGTC CCTGTTGGAG
CTGCGCAACC TGGAGGTCCA TTTCCCTGTG CGTAAGGGAG TACTACGGCG AGTAGTCGAT
CATGTCCGGG CCGTGGATGG GATAAATATG GCTATTCCAG CCGGGCAAAT TCTGGCACTG
GTGGGCGAAT CGGGCTGTGG CAAAACCACG CTGGGGCGGG CCATACTCCG TCTGGTAGAG
CCTACCAGCG GCCAAGTTCA TTACGCGGGC ACCGATCTAA CCGCATTGAA GCCCAGGGAA
TTGCGCCGTT ACCGGCAAAC GCTGCAGATC ATCTTTCAGG ACCCTATGTC CTCCCTCAAT
CCGCGCCTCT CCATTGCAGC AACCTTAACT GAGCCCATGG GAGTCCACGG CATCGGCGAT
TCCCGCGAGG AACGTCTCGA ACAGGCTAGT GCTGTGCTGG AGCGAGTTCA ACTCAAGACC
CATCATCTGT GGCGTTATCC CCACGAGTTC TCCGGTGGTC AACGCCAGCG TATCGCTATC
GCCCGGGCCC TGGTGCTGGA GCCCCGGTTT ATTGTCTGCG ATGAAATCAC TAGCGCCCTA
GACGTATCGG TACAAGCGGA AATCCTGCAA TTGCTATTGG AGTTGCAGCG GGAACGCCAC
CTCACCCTGT TATTTATTAC CCACAACATC GCCGTAGTAG AATACCTTAG CAACCAAATT
GCGGTAATGC GGGATGGTTG TATCATTGAA CAAGGCCCTA CGGACCAGGT CTGCCGGGCA
CCCACTCACC CTTATACACA AAAACTGCTA GCGGCGGTAC CGCGAGTCCC CCTATAA
|
|---|
| Protein sequence | MLLQVENLKT YLQAGGETVK AVDGISFTIE RGETFCLVGE SGSGKSVTAL SVIQLLPRDI
SHHPEGRILL DWRQDKQRHE PVDLLRLPET RKQKIRGARI AMIFQEPMTS LNPVFTVGEQ
IIETLQLHFP GMEETEARER AVAALAQVQI SNPELRIDEY PHRLSGGQRQ RVMIAMAMAC
EPDLLIADEP TTALDVTVQA EILRLMRELQ TRRNMGILFI THDFGVVSQM ARRLAVMRLG
KIVESGTLDE ILYRPQHPYT CQLLAALPEN LKRRQRTSAR ESGIDAPPSY TGTKQPSLLE
LRNLEVHFPV RKGVLRRVVD HVRAVDGINM AIPAGQILAL VGESGCGKTT LGRAILRLVE
PTSGQVHYAG TDLTALKPRE LRRYRQTLQI IFQDPMSSLN PRLSIAATLT EPMGVHGIGD
SREERLEQAS AVLERVQLKT HHLWRYPHEF SGGQRQRIAI ARALVLEPRF IVCDEITSAL
DVSVQAEILQ LLLELQRERH LTLLFITHNI AVVEYLSNQI AVMRDGCIIE QGPTDQVCRA
PTHPYTQKLL AAVPRVPL
|
|---|
| |