Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2727 |
Symbol | |
ID | 3704753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3095735 |
End bp | 3096802 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637739209 |
Product | ApbE-like lipoprotein |
Protein accession | YP_344710 |
Protein GI | 77166185 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.619342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTGGA TTTTGAAACT GATTCTCCGT CTATTTAGGC CGGCGGGCAT CCTGCTTTGC CTGGTATTGA CCGCTTGCGC GGAGTCAGGA GAGGATCATC TGACCTGGTT GAGCGGCGCT ACCATGGGCA CGGGATATTC CGTCAAGATC GTGGACCTTC CTGCCCGGAT CGACCCCGAG GTATTGGATC GGGATATCGC CCGGTTGCTC GAAGAAATCA ATGGATTGAT GTCCACTTAC CAAGCGGATT CTGAACTATC CCGCTTTAAC CGTAATAAGC GTACTGATTG GGTCAGCGTT TCCACAGAGA TCGTCAAGGT ATTAGAGGAG GCTCAGAGCA TTAGCCGTTT GAGCAAAGGC GCCTTTGATG TGACAGTGGG GCCACTGGTT AACCTCTGGG GGTTTGGCCC CGGCTCCTAT ACCAATGAGA TCCCTTCGCG GCGGGAGATG GAGGCTGAGA AGGAAAGGGT CGGTTTTAAG CAGTTGCAGG TACGGCATTC ACCCCCTGCT GTCAGGAAGA AGCGGGGGGA TATTTATGTG GATCTTTCGG CGATTGCTAA AGGCTACGGC GTGGATCGCA TCGCGGAACT TTTGGAGGCC CAAGGAATTT ACCATTATCT AGTGGATATT GGCGGAGAAG AACGAATCCA AGGACACGGT CCGGAGGGTG CCCCGTGGCG AATTGCGATT GAGCGGCCAG TAGCAGGTGA ACGCCGGGTG CAGCGTATCC TTGAGCTAGA TTCCGGCGCG GTGGCTACTT CAGGCAATTA TCGTAATTAC TTTGAGCAGG ATGGAAAGCG TTACTCGCAT ACGCTCGATC CTCGAACGGG TTGGCCTATT ACCCATAAAC TTGCCTCGGT GACGGTGGTC GATGCCACCG CCATGCGGGC AGACGCTTTA GCTACGGCGC TGTTCGTGCT TGGCCCAGAG GAAGGATTAC AATTGGCCGA GCAGGAACAA ATCCCAGCCC TGTTTATAAT TAAAATGTCA GGGAGGTTTA GAGAGAGAGC CACCCGGAGT TTTACTAAAA TTCGTTCCTG GGACTTGCGG GAAAAGGAAA GTTTCTAG
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Protein sequence | MPWILKLILR LFRPAGILLC LVLTACAESG EDHLTWLSGA TMGTGYSVKI VDLPARIDPE VLDRDIARLL EEINGLMSTY QADSELSRFN RNKRTDWVSV STEIVKVLEE AQSISRLSKG AFDVTVGPLV NLWGFGPGSY TNEIPSRREM EAEKERVGFK QLQVRHSPPA VRKKRGDIYV DLSAIAKGYG VDRIAELLEA QGIYHYLVDI GGEERIQGHG PEGAPWRIAI ERPVAGERRV QRILELDSGA VATSGNYRNY FEQDGKRYSH TLDPRTGWPI THKLASVTVV DATAMRADAL ATALFVLGPE EGLQLAEQEQ IPALFIIKMS GRFRERATRS FTKIRSWDLR EKESF
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