| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2690 |
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| Symbol | |
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| ID | 3704447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3049756 |
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| End bp | 3050454 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637739172 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_344673 |
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| Protein GI | 77166148 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.608582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATC TACTGATTAC CGGCACTAAC CGGGGTATTG GACTGGAATT CAGCAAGCAA
TATGCCGAAA CGGGCTGGCG AGTATTCGCT TGTTGCCGCC ACCCTGGCAA GGCCGATGCA
CTCAAGCAGC TCGCGGCGCA GCATCCCGGT TCGCTCAGTT TGCATACCTT GGATGTGGCT
GACTTTGATC AAATCGAGGG ACTAGCCGCG GAACTCACCG GAGAAAAAAT TGATTTGCTG
GTCAACAATG CAGGCATCTA TGCTGATACT TTCAGAGGCG GTTTCGGCGC TACCGATTAC
CAGGCATGGT TGCGCGCCTT TTGCGTGAAC ACGACAGCAC CGCTGAAAAT GGCAGAAACA
TTCGCCAGTC AAATTGCCCA AAGCCAGCAA AAAAAGATTG TTTGCATCAG TAGCAAAATG
GGCAGTATTG CCGAGAATAC CAGCGGTGGC TGTTATCTTT ACCGCTCAAG TAAAGCGGCC
CTGAATATGG TGGTAAAAAG TCTTTCCATT GATTTGGCGC CACGAGGTAT CCTTGCCGCA
GCGCTGCATC CAGGCTGGGT ACAGACCGAT ATGGGGGGAC CTAATGCGCT GATCACGACA
CAGCAAAGCG TAGCAGGCAT GCGTCAAGTA ATCGAGCAAC TTACCCCCCA GCAGAGCGGA
GGATTTTACG CCTATGATAG CAAGGAAATT CCTTGGTAA
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| Protein sequence | MPNLLITGTN RGIGLEFSKQ YAETGWRVFA CCRHPGKADA LKQLAAQHPG SLSLHTLDVA
DFDQIEGLAA ELTGEKIDLL VNNAGIYADT FRGGFGATDY QAWLRAFCVN TTAPLKMAET
FASQIAQSQQ KKIVCISSKM GSIAENTSGG CYLYRSSKAA LNMVVKSLSI DLAPRGILAA
ALHPGWVQTD MGGPNALITT QQSVAGMRQV IEQLTPQQSG GFYAYDSKEI PW
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