| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2623 |
|---|
| Symbol | |
|---|
| ID | 3704514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2978192 |
|---|
| End bp | 2979349 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637739104 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_344606 |
|---|
| Protein GI | 77166081 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCT CTCCACCGAA AATTAATCAT TTTACTGGCA ACGCAAGAAC CCAGCCTCTA
TGGCTGCTAG CGGAGCTTAC CTATGCCTGC CCCCTGCAAT GTCCGTACTG TTCTAACCCC
TTAGACTTTG CTAACTACAA ACATGAACTC TCTACGAAGG ACTGGTTGCG GGTATTCCAT
GAGGCCCGGG CTATGGGGGC CGCTCAGCTA GGATTCTCTG GCGGTGAACC TCTGGCTCGG
CGTGATCTGG AAGTGCTCAT CACCGAAGCC CGTAAACTTG GCTATTACAC TAATCTCATT
ACTTCCGGCA TCGGCATGGA TGAAGACCGA ATTGCGGCTT TTAAAACCGC TCGTCTCGAT
CACATCCAAA TTAGTTTCCA GGCTGCTTCC GAAGATCTCA ATAATCGGCT TGCCGGCGCG
GATGTTTTTC AGTATAAACT GGCCATGGCC CGGGCCGTGA AAAAACACGG CTATCCCATG
GTGCTATGCT TTGTTCTCCA TCGCTATAAT ATTGACCAGA TAGGCAAAAT TCTGGATCTT
GCCATCGAAC TCAAAGCCGA CTATGTGGAA TTGGCCACTA CCCAGTATTA TGGCTGGGCC
TGGCATAACC GAAACCACTT ACTCCCCACC AGGGAACAGC TAGAACGGGC TGAGGCCCTA
GCCCGCCAGT ACCAAGTCCG CACACAGGGA AAAATGAAGA TTTATTATGT GGTGCCGGAT
TATTACGAGA ACCGCCCCAA GGCCTGCATG AATGGTTGGG GAAATATTTT TCTCACCATC
GCGCCGGATG GAACCGCCCT CCCCTGCCAT GCTGCCCGCC AGCTACCCGG ACTTACCTTA
CCCAATGTAA AAAGCCATAG TATTGAGTGG ATCTGGTATG AATCACCGGA CTTTAATTTA
TTCCGGGGCC AAGGATGGAT GAAGGAACCT TGCCGAAGTT GCCCCGAACG TTTCAAGGAC
TTTGGGGGAT GCCGCTGTCA GGCCTATTTA TTGACGGGCG ATGCTCGTAA TACCGATCCC
GTCTGTGATC TATCCCCCCA CCATCAGACT GTGGTAGACG CTATTACCGC AGCTCACCAG
CAAACACCTT TACCGGCAAA CAAGAGCAAA CCACCGATAT TCCGTCATCT ACGAAATTCT
AAAAAATTCT GTGGCTAA
|
|---|
| Protein sequence | MAGSPPKINH FTGNARTQPL WLLAELTYAC PLQCPYCSNP LDFANYKHEL STKDWLRVFH
EARAMGAAQL GFSGGEPLAR RDLEVLITEA RKLGYYTNLI TSGIGMDEDR IAAFKTARLD
HIQISFQAAS EDLNNRLAGA DVFQYKLAMA RAVKKHGYPM VLCFVLHRYN IDQIGKILDL
AIELKADYVE LATTQYYGWA WHNRNHLLPT REQLERAEAL ARQYQVRTQG KMKIYYVVPD
YYENRPKACM NGWGNIFLTI APDGTALPCH AARQLPGLTL PNVKSHSIEW IWYESPDFNL
FRGQGWMKEP CRSCPERFKD FGGCRCQAYL LTGDARNTDP VCDLSPHHQT VVDAITAAHQ
QTPLPANKSK PPIFRHLRNS KKFCG
|
|---|
| |