| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2615 |
|---|
| Symbol | |
|---|
| ID | 3704370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2970570 |
|---|
| End bp | 2971850 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637739096 |
|---|
| Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
|---|
| Protein accession | YP_344598 |
|---|
| Protein GI | 77166073 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.657295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTT CAGCTTTGCG GACCCTCTAC AGCCTATTGT TTTATTTGTT CACCCCCCTG
GTGATAATTC GCCTCCTGTG GCGAGGTTAT CGCACCCCAG CCTATCTTCA CCGCTGGGGA
GAACGGTTCG GTTTGGCTCC CTTCCTGGCT GGGAAAGCAG TTATCTGGGT ACATGCGGTA
TCGGTGGGAG AAGTCCAAGC TAGTGTGCCC TTAGTGCGGG CCTTATTGGA CCGTTATCCC
GATCATACGC TGCTGCTGAC GACCCTCACT CCCACGGGCT CGGCCCAGGT CCAAAGGCAA
CTGGGAGCAC AGGTGGCGCA CTGCTATTTG CCCTACGATT TGCCTGATGC CATCGCCCGC
TTCCTGCAAC GGGTTCAGCC CCAGTTTGGC GTTATTCTGG AAACAGAACT TTGGCCCAAC
CTGCTGCATC AATGCCAATG CCGCAAGATC CCGATTATTT TGGCCAACGC CCGTCTCTCG
GAACGCTCGG CGTTGGGCTA TTGCCGTTTA GGCATGCTTA CCCGTGACAT GCTTTCTAAG
CTTACTTTTA TTGCCGCCCA GGGAAAAGCT GATGCTAACC GCTTTATCGC CCTTGGGGCT
CCCCCTGAGC GGGTCCAGGT GACTGGTAAT CTCAAATTTG AACTCAAACT TCCCTCCCAC
CTGCCCACCC AGGGAATGAT ATTAAGGCGC CAATGGGGTG AGCAGCGTCC CCTATGGATT
GCTGCCAGTA CCCATGAAGG GGAAGAAGAG CAGGTTTTGG CTGCCTTTAA GCAGGTACAG
AAACGCTATC CGACTGCCCT GCTGGTACTC GTACCGCGCC ATTCGCAGCG CTTCAACCGT
GTTCATCATT TGTGCCAACG GCAAGGTTTT ATCACCCAGC GTCGGAGTGA GCAGCAGGCT
TGCGCGCCTG CTACCGAAAT TTTCATCGGG GACAGTATGG GCGAACTTCC CTTATTCTTT
GCGGCTTCAG ATGTGGCTTT TCTCGGAGGC AGCCTTGTTC CTGTAGGCGG ACACAACCCT
TTGGAACCCG CTGCCCTAAA ACGGCCTGTT ATTCTAGGTC CCCATATATT TAATTTTATG
GGAATCAGTC ACCAACTGCT GGAAGCGGGC GCGGCAACCC AGATACAAAC AATTCAGGAT
TTAACCCAAG CAGTACTGCG CTATCTGGAC GATCCCCAAC TGCGCACCAA AGCGGGCAAG
GCGGGGCAGC AGGTGATTGC CCAAAATCAA GGCGCATCAA GCAAAATAAT ACAGCAGATT
ACTATCCTTT TAAGCGGCTA A
|
|---|
| Protein sequence | MPASALRTLY SLLFYLFTPL VIIRLLWRGY RTPAYLHRWG ERFGLAPFLA GKAVIWVHAV
SVGEVQASVP LVRALLDRYP DHTLLLTTLT PTGSAQVQRQ LGAQVAHCYL PYDLPDAIAR
FLQRVQPQFG VILETELWPN LLHQCQCRKI PIILANARLS ERSALGYCRL GMLTRDMLSK
LTFIAAQGKA DANRFIALGA PPERVQVTGN LKFELKLPSH LPTQGMILRR QWGEQRPLWI
AASTHEGEEE QVLAAFKQVQ KRYPTALLVL VPRHSQRFNR VHHLCQRQGF ITQRRSEQQA
CAPATEIFIG DSMGELPLFF AASDVAFLGG SLVPVGGHNP LEPAALKRPV ILGPHIFNFM
GISHQLLEAG AATQIQTIQD LTQAVLRYLD DPQLRTKAGK AGQQVIAQNQ GASSKIIQQI
TILLSG
|
|---|
| |