| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2592 |
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| Symbol | rho |
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| ID | 3704674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2945628 |
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| End bp | 2946884 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637739072 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_344575 |
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| Protein GI | 77166050 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00987626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCTGA CTGAACTCAA GACGAAGAGC GCTTCCGAAC TCTTAGATAT TGCCCAGTCC
ATGGGGCTAG AAGGTATTTC CCGCCTGCGC CGACAAGATC TTATCTTTGC ACTTCTCAAA
GCGCATGCGA AGAATGGCGA GGATATTTAC GGCAACGGAG TATTAGAATT GCTCCAGGAT
GGATTTGGTT TTCTCCGCTC GGCCAGTGCC TCCTATCTTG CCGGGCCTGA TGATATTTAT
GTCTCACCTA GCCAGATAAG GCGTTTTGGA CTCCGTACTG GGGATACCGT TGAAGGTAAA
ATCCGACCTC CTAAAGAGGG AGAGCGCTAT TTTGCCCTAC TTAAGGTCAG CAGCATCAAT
TTTGAGCCGC CAGAGCAGTC TCGAAATAAA GTATTATTCG AGAATTTGAC CCCTTTATTT
GCTAATGAAC GCTTAGTCTT GGAGCGGGGC AATGGGAGTA CGGAGGATCT CACCCCTCGG
GTAATAGATT TAGTGGTGCC GGTAGGTAAG GGGCAGCGAG GGCTCATTGT CTCTTCTCCC
AAATCGGGAA AGACTGTGAT GCTTCAGAAT ATTGCCCAAT CCATCGCCGC TAACCATCCG
GAATGCTATC TTATAGTGCT GCTTATCGAT GAGCGGCCCG AAGAAGTAAC GGAAATGGCC
CGTTCGGTAC GAGGTGAGGT TGTCTCTAGT ACTTTCGACG AACCTGCAAG CCGTCATGTT
CAAGTAGCGG AAATGGTAAT AGAAAAAGCT AAGCGACTAG TAGAGCATAA GCGGGATGTT
GTTATTTTAC TCGATTCCAT TACCCGTTTG GCCCGCGCTT ATAATACGGT GATTCCTTCA
TCTGGCAAAG TCCTCACCGG GGGGGTCGAT GCTAATGCGT TACAACGGCC AAAGCGTTTT
TTTGGCGCAG CCCGCAATCT AGAGGAGGGA GGTAGTTTAA CTATTATCGC CACTGCTCTT
ATTGATACCG GTTCACGCAT GGACGATGTG ATTTATGAAG AGTTCAAAGG CACTGGCAAC
ATGGAGATCC ATTTGGAGCG AAAACTTGCT GAAAAGCGAG TCTACCCCGC AATTAATATC
AGCCGCTCGG GCACGCGGCG TGAAGAGCTC CTCACCAATC CAGAGAATCT GCAAAAAACA
TGGATTTTAC ACAAATTGCT TGCACCAATG GACGAGGCGG AAGCCATGGA GTTTTTGCTT
AGTCGGCTCA AAGAAACCAA AACTAACGAC GAATTTTTCA ATTCCATGAA ACGATAA
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| Protein sequence | MNLTELKTKS ASELLDIAQS MGLEGISRLR RQDLIFALLK AHAKNGEDIY GNGVLELLQD
GFGFLRSASA SYLAGPDDIY VSPSQIRRFG LRTGDTVEGK IRPPKEGERY FALLKVSSIN
FEPPEQSRNK VLFENLTPLF ANERLVLERG NGSTEDLTPR VIDLVVPVGK GQRGLIVSSP
KSGKTVMLQN IAQSIAANHP ECYLIVLLID ERPEEVTEMA RSVRGEVVSS TFDEPASRHV
QVAEMVIEKA KRLVEHKRDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALQRPKRF
FGAARNLEEG GSLTIIATAL IDTGSRMDDV IYEEFKGTGN MEIHLERKLA EKRVYPAINI
SRSGTRREEL LTNPENLQKT WILHKLLAPM DEAEAMEFLL SRLKETKTND EFFNSMKR
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