| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2588 |
|---|
| Symbol | |
|---|
| ID | 3704670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2941464 |
|---|
| End bp | 2942705 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637739068 |
|---|
| Product | HflK-like protein |
|---|
| Protein accession | YP_344571 |
|---|
| Protein GI | 77166046 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0268051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGGA ATGAGCCGAA CGGGAACAAA GATAAAGATC CTTGGAATAA AGAAGGGGAT
CAATGGGGCA AAGACGGCGA CCGGCAAGGT CCTCCGGATC TTGATGAAGT TATCCGCAAT
CTAAAAGCCA AGCTTAGTGG GTTATTCGGT GGTAAGGGAG GTGGAGGCCC CGGTGGTGGC
CGCCCAACTT TAGGCCGAGG GGGGAGCATT CTAGGATTAG CTCTATTAGT GCTAGTCCTT
GCTGTAGCTT GGGGACTGTC GGGTATCTAT ATTGTTGCTC CTGCTGAGCG TGGAGTGGTA
TTGCGATTTG GCGAATACGT TGCTACTACT GAGCCAGGAC CTCACTGGCA CATTCCTTAT
CCTATTGAGA AGGTAGAGCT GGTTGATGTG GCGCAAATTC GAAGCTACGA GATTGGCTAC
CGTTCTACGG GTAGAGGACA AGCCGGGTCA CCAGTGCCAA CCGAGGCGCT GATGCTCACC
CAAGACGAAA ATATCGTAGA TGTTCGGATT GCAGTCCAAT ATCGAGTTAA AGATGCGGCT
AATTATTTAT TTAATGTGCG TAATGCGGAT ACTAACCTAC GCCAAGTGGT CGAAAGCGCC
CTTCGGGAGG CTGTGGGTAA AAGTAAAATG GATTTTGTTT TGACCGAAGG GCGCAGTGAT
ATCGTGCTTC GTACAGAGGA ATTAGCGCAG CAGGTTTTGG ATCAATACCA TGCAGGGCTG
ATTATCACCA GTGTCAACAT GCAAGATGCT CAACCGCCAG AACAAGTGCA GGCGGCCTTT
GCGGATGCCA TTAAGGCGCG GGAAGATCAG CAACGACTAA GAAACGAGGC CGAGGCGTAC
GCCAATGATA TTATCCCTAG AGCACGTGGT GCCGCTTTCC GTAAGGTCCA GGAGGCGGAA
GCTTATAAAA GCGAAGTTGT TGCCCTTGCG GGAGGTGAGA CAGCCCGCTT TGAGCAGGTG
TTGAAAGAAT ACCTAGATGC GCCGGAAATT ACTGAAAAAC GGCTTTATTT GGAAACCATG
GAAACGGTAA TGGAGCGCAG CCGCAAAGTT TTGGTGGACG TACCTGAGGG CACTAATGTC
TTTTATCTTC CTCTGGACCG TATGGTAAAC GAGGGAAATC CTAAGGAGCA GCGTCTTATT
TCTCTTGATC GGTTATCTTC TTTTAACAGT GAAACCTCGG CCAGTGAGGA GCAGAGACGC
CAGAATAGCA ATGATGATAG CCGGAGTCGG AGGGGACGAT GA
|
|---|
| Protein sequence | MAWNEPNGNK DKDPWNKEGD QWGKDGDRQG PPDLDEVIRN LKAKLSGLFG GKGGGGPGGG
RPTLGRGGSI LGLALLVLVL AVAWGLSGIY IVAPAERGVV LRFGEYVATT EPGPHWHIPY
PIEKVELVDV AQIRSYEIGY RSTGRGQAGS PVPTEALMLT QDENIVDVRI AVQYRVKDAA
NYLFNVRNAD TNLRQVVESA LREAVGKSKM DFVLTEGRSD IVLRTEELAQ QVLDQYHAGL
IITSVNMQDA QPPEQVQAAF ADAIKAREDQ QRLRNEAEAY ANDIIPRARG AAFRKVQEAE
AYKSEVVALA GGETARFEQV LKEYLDAPEI TEKRLYLETM ETVMERSRKV LVDVPEGTNV
FYLPLDRMVN EGNPKEQRLI SLDRLSSFNS ETSASEEQRR QNSNDDSRSR RGR
|
|---|
| |