Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2554 |
Symbol | |
ID | 3704557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2905281 |
End bp | 2907233 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637739033 |
Product | NADH-plastoquinone oxidoreductase, chain 5 |
Protein accession | YP_344537 |
Protein GI | 77166012 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTCC AGACTCTTGG AATTGTGTTT GCGCCCCTGA TCGGCAGCCT CATTGCTGGC TTGTTTGGAA AGAAGATTGG GCGCCTCTGG TCCCATCGAG CTGCTATTGC CGGGGTAAGC ATTGCATTTT TGTTATCTCT CATGGTGTTT AAGCAAGTGG TGGTGGATGG AGTCATCTAT AATGAGGCCG TCTACACTTG GGTCGCTGTT GGCGATTTAC GCGTGGAAAT CGGTTTTCTT ATTGATCGTT TAAGCGCGCT AATGATGGTA GTGGTGACCT TTGTTTCCCT AATGGTACAT ATTTATACCA TCGGCTATAT GGCGGATGAT CCTGGCTATC AGCGTTTTTT TAGCTATATC GCTCTTTTCA CTTTTTCCAT GCTGATGTTG GTCATGGCAA ATAATTTCCT CCAATTGTTT TTTGGATGGG AAGCCGTGGG CTTGGTGTCC TACCTATTGA TAGGTTTTTG GTATAAGCGG GAATCCGCCA TTTATGCCAG TCTTAAAGCC TTTTTAGTTA ACCGGATTGG TGATATAGGT TTTTTGCTGG GGATCGCCTG CGTATTAATG TATACGGGGA GCCTGGATTA TGTAGAGGTA TTTACAGTGG TGCCTACGCT GACGGAGGAA ACACTTTCTG TTTGGCCAGG AACCGCTTGG TCGGTGCTTA CGGTGATAGG AATTTTACTC TTCATTGGTG CTATGGGTAA ATCGGCGCAA GCACCCTTGC ATGTGTGGTT GCCGGATTCC ATGGAAGGCC CGACCCCGAT TTCCGCTCTT ATTCACGCGG CAACCATGGT GACTGCAGGT ATTTTTATGG TCGCCCGGAT GTCGCCGATC TATGAGCTGT CCGAAATTGC TCTGAGCGTT ATTTTAGTCA TTGGCGCAAT TACCGCTTTC TTTATGGGGC TGATAGGTAT TGTCCAGAAT GACATCAAGC GAGTAATCGC CTATTCCACC TTGTCACAGT TAGGATATAT GACGGTGGCG CTTGGGGTTT CCGCCTATGC GGCGGGAATC TTTCATCTCA TGACTCACGC CTTTTTCAAG GCGTTGCTTT TCCTGGGGGC GGGATCAGTG ATTATCGCGA TGCACCACGA GCAAGATATG CGTAAGATGG GTGGGCTAAA AAAATATATG CCTGTCACCT ACTGGACTGC AATAATAGGT GCGTTAGCGC TAATTGGTTT TCCTGGGTTT TCTGGATTTT TTTCCAAAGA CTCCATTATC GAAGCTGTTC ACGCTTCTCA ACTTCCCGGT GCGGGCTTTG CTTACGCGAT GGTTGTTTCC GGCGTATTTG TTACAGCCTT TTATACCTTT CGAATGTTGT TTCTCACATT TCACGGGGAG GAACGGATGG ATCAGCATAC CCGCGCACAC TTAAAAGAGT CTCCAGCGGT AGTGACCGTG CCTTTGGTGT TATTGGCTAT CCCTTCGGTA GTGGCTGGTA TTTTTATTGA ACCAATTTTG TTTGGTGGTT TTTTTGGCGA GGCAGTTATG GTTTCTCCAG CTCATAATGT GCTGGCAGCG GTAAGCGCTG ATTTTCATGG AGCGATGGCT TTTGCCTTGC ATGGCTTTCA GGGGCTTCCT TTCATACTGG CTATGGTGGG GGTCGTAGCA GCTTGGTATT TATATCTCAA GCGTCCTCAG CTGCCAAAGC AATTGCGGAG CCGTTTTGGC TTGCTTTATT GGGCCTTGAG TAACAAATAT GGGTTTGATC GTTTCAATGA AATTTTCTTT GCGGGTGGAG CGCGCCAGGC AGGCAGGTTG CTTTCACAGC TTGGGGATCG AATGCTGATT GACGGTTTTT TCGTCAATGG AACGGCACGG GTAGTCGGCG TAATCGCTCA AATCACCCGT TATTTGCAGT CCGGTTATCT TTTTCATTAT GCCTTTGCCA TGATTTTAGG GCTGCTTTTT CTTATCGGCA GTTTCGTCAT TTACGGGGGC TAA
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Protein sequence | MEVQTLGIVF APLIGSLIAG LFGKKIGRLW SHRAAIAGVS IAFLLSLMVF KQVVVDGVIY NEAVYTWVAV GDLRVEIGFL IDRLSALMMV VVTFVSLMVH IYTIGYMADD PGYQRFFSYI ALFTFSMLML VMANNFLQLF FGWEAVGLVS YLLIGFWYKR ESAIYASLKA FLVNRIGDIG FLLGIACVLM YTGSLDYVEV FTVVPTLTEE TLSVWPGTAW SVLTVIGILL FIGAMGKSAQ APLHVWLPDS MEGPTPISAL IHAATMVTAG IFMVARMSPI YELSEIALSV ILVIGAITAF FMGLIGIVQN DIKRVIAYST LSQLGYMTVA LGVSAYAAGI FHLMTHAFFK ALLFLGAGSV IIAMHHEQDM RKMGGLKKYM PVTYWTAIIG ALALIGFPGF SGFFSKDSII EAVHASQLPG AGFAYAMVVS GVFVTAFYTF RMLFLTFHGE ERMDQHTRAH LKESPAVVTV PLVLLAIPSV VAGIFIEPIL FGGFFGEAVM VSPAHNVLAA VSADFHGAMA FALHGFQGLP FILAMVGVVA AWYLYLKRPQ LPKQLRSRFG LLYWALSNKY GFDRFNEIFF AGGARQAGRL LSQLGDRMLI DGFFVNGTAR VVGVIAQITR YLQSGYLFHY AFAMILGLLF LIGSFVIYGG
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