Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2488 |
Symbol | |
ID | 3704373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2833710 |
End bp | 2835050 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738967 |
Product | FeS assembly protein SufD |
Protein accession | YP_344471 |
Protein GI | 77165946 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGGA TCAGTGAGGC CTGGCAGCCC TATGTGGATT CCTATGCCCG CCTGGAACCG GATCTGGCGG GGGCGAATCT ACCCTGGCTG CGAGAATTAC GCCAGCAGGC ATTGGCCCGT TTTATCTCCC TCGGCTTTCC TGGTCTCAAG AATGAGGATT GGAAATATAC GCGAGTCCGT GCGCTGGCCG AGACTGCATT TAACTCGGCG GTTTCTTCAT CGGTAGCGGT CAGTTTAGAG CAATGTCAAA GGTATTTTTT AGCAGAGACG CCCTGTTTTC GGTTGGTATT TGTTGATGGT TGCTTTGCTC CGGGGTTATC AGAGATTGAA GATCTCCCGG CTGGTACGGT GGTGGGCAAT TTAGCCGGCT GTTTCAAACA GCAGGGGGAA AGCCTGCGCG GGGTATTGGC CAGTTATGCG GACTATCAAA ACCAGCCTTT CACCGCGCTT AATACTGCCT TCATGGCCGA TGGCGCTTAT CTTTATTTAC CCCCCAGGAC CGTACTGGCC AAGCCGGTAC ATCTGATATT CCTGACTACG GGGCGTAGCG AAGCCGTCGT GACTCACTCC CGTAATTTGA TAGTTCTCGA GCCGGAGAGT GAACTGACGG TTATTGAGCA CTATGCTGGG TTAAATGATG CCGTATATTT CACGAATACG GTCACCGAAA TAGCCGCGGG AAAGGGGGCT AATGTTGAGC ATATCAAATT GCAAGAGGAA TCGGCTAAAA GCTTTCATAT TGCTACGATA CAGGTCCAGC AGGAACAGGA TGCGCAGTTT CTTTCCCGTA ATCTGGCTTT GGGGGGGCGG TTAGCCCGCA ACGATATCAA TAGCGTATTG GCAGGGGAGG GCGCCGGGTG CATTTTGGAG GGACTCTATG TTTTAGATGG TGTACGTCAC GTAGATAACC ATACGAGAGT TGACCATCAA CAGCCACATA CCACTAGCCA GGAATTCTAC AAAGGAATTT TAGATGGTAA ATCGCGGGCA GTCTTTAATG GCAAAGTGAT TGTTCACCCT CATGCGCAAA AAGCGGATGC CCGCCAGGCC AACCGCAATT TGCTGCTGTC TGAAGGGGCT GAAGTCGATA CCAAACCAGA ACTTGAAATC TACGCTGACG ATGTTAAGTG TGCTCATGGG GCCACGGTCG GACAATTGGA TAAAGATCAA ATTTTCTATC TTCGCTCCCG CGGGATGGAA GAGGATGCAG CGCGCCAGCT CTTGACCTAT GCTTTTGTCG AAGAAATTGT TAGGCGCATC AAACTACGTC CTATCCGCGC CCGTATCGAA CATAGATTAA GCGCACAATT TTCTGAACCA CAGCGCAAGG AGGTGGGTTG A
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Protein sequence | MKGISEAWQP YVDSYARLEP DLAGANLPWL RELRQQALAR FISLGFPGLK NEDWKYTRVR ALAETAFNSA VSSSVAVSLE QCQRYFLAET PCFRLVFVDG CFAPGLSEIE DLPAGTVVGN LAGCFKQQGE SLRGVLASYA DYQNQPFTAL NTAFMADGAY LYLPPRTVLA KPVHLIFLTT GRSEAVVTHS RNLIVLEPES ELTVIEHYAG LNDAVYFTNT VTEIAAGKGA NVEHIKLQEE SAKSFHIATI QVQQEQDAQF LSRNLALGGR LARNDINSVL AGEGAGCILE GLYVLDGVRH VDNHTRVDHQ QPHTTSQEFY KGILDGKSRA VFNGKVIVHP HAQKADARQA NRNLLLSEGA EVDTKPELEI YADDVKCAHG ATVGQLDKDQ IFYLRSRGME EDAARQLLTY AFVEEIVRRI KLRPIRARIE HRLSAQFSEP QRKEVG
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