Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2478 |
Symbol | |
ID | 3704616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2822455 |
End bp | 2824437 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738957 |
Product | asparagine synthase, glutamine-hydrolyzing |
Protein accession | YP_344461 |
Protein GI | 77165936 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.669542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGGT TTGCAGGTTT TTATGATTCT TCGTTGCCGG TGGATCAGGC GGGAGAAATC CTCACTAAAA TGGCATCAGA GCTAATTCAT CGAGGGCCGG ATGACGAAGG AATCTGGTGC GAACGGGAAA CGGGAATTCA TTTTACTCAT AGACGTTTAG CGGTGGTGGA TCTTTCCGCC AGTGGCCATC AGCCCATGCT TTCTGCTAGT GGCCGTTACG TGATTGTCTT TAATGGGGAA ATTTATAATT ATAAAGCACT GCGGACAGAG CTAGAAGGAA GAGAAACCCA GTGGCATGGC TATTCGGATA CCGAGGTTTT GCTGGCGGGG ATTGAGGCGT GGGGAGTAAG CAAAACTCTG CAGCGCTGTG TGGGCATGTT TGCCCTGGCC CTTTGGGATA GAAAGGCGCG GGTGCTTTAT CTTGCTCGGG ACCGGCTGGG AGAAAAACCT TTATATTACG GTTGGATGAA GGGAGCTTTT TTATTTGGTT CCGAACTCAA GGCGTTACGA GCCTATCCAT TCTGGCAGGG GGAGATAGAT CGGAAAGCGG TAACGCTTTT GATGCGTCAT AATTACATCC CTAGCCCTTT TTCTATTTAC CAAGGGATCT ATAAACTTCC GCCGGGATGT TTTTTAGCGT TAAGTTGGGA AAGTTTAAGG GTAAATAAGG CGCTTGCCCC CTTTCCGCAA GAGGGAGAAA GGAGCGTTCT GCAACCTTAT TGGTCCGCCT GGAAGGCAGT GGAAAACGGG GTGACAGTCC CTTTTAGGGG TAGTGATAAA GAGGCCATCG CTGAACTGGA GAAGCGGCTA CGAGATGCTG TGGTAGGTAA GATGGTCGCT GATGTTCCTC TGGGCGCCTT TCTCTCCGGG GGAATTGACT CTTCTACGGT TGCCGCCCTA ATGCAAGCCC AAAGCAGCCA GCCCATTCGA ACTTTCTCTA TTGGTTTCCA CGAGGAGGGT TATAATGAAG CGGTTCATGC CGCCCAAGTG GCCCATCATT TAGGCACGGA TCATACTGAA CTCTATATCA GTCCGGAGGA AGCCATGGCC GTGATCCCAC GGCTTCCCAG CATCTACGAT GAACCTTTTG CTGATTCCTC TCAGATTCCT ACTTTTCTGG TGTCCCAGTT GGCACGACGG CATGTCACCG TGGCCCTGTC TGGAGATGGA GGCGATGAGC TGCTAGGCGG CTATAATCGC TATTTCTGGT GCAAGCAGAT TTGGAATAAG GCAGGCAGGT TTCCCCGCCT CGGGCGTCAG TTGGCTGCTC AAATGCTGGG GGCTCTCCCT CCTTCGGTTT GGGATAAGGT TTTTGCAAGT CTGGACCCCA TCTTGCCAGC CCGATTCCGG CAGGCCCATC CGGGCGATAA ATTGCATAAG CTAGCAGCCA TTTTGGCCTC GGACTCTCCA GCGGTTATTT ATGAGCAGCT GATTTCCCAG TGGCAGAATC CTGGCAGCAT TGTTATTAAT GGTTTCGAGC CTTCGGGTTC AGCTAATAAA GTTTGGTCCT ATCCTGCACT GACTAATCTT ACCGAACGGA TGATGTTCCT CGACCTAATA ACCTATCTTC CCGGTGATAT CCTGACCAAA GTGGATCGGG CAAGTATGGC GGTGAGTTTA GAAACCCGTG TTCCGCTGCT CGATCATCGC TTGGTGGAAT TTGCCTGGCG CCTACCGCTT GGGTTGAAGG TACGGGCGGG GACAGGCAAG TGGATATTGC GTCAGGTTTT ATACCGTTAT GTCCCTGAGG CATTGGTAGA ACGCCCAAAG ATGGGTTTCG GGGTTCCTAT TGACGCGTGG TTACGGGGTC CGCTGCGCCA CTGGGCGGAA GATTTACTTG ATGCCAGCAA GCTTAGGAGA GAAGGATATT TCTACCCTGA GCCTATCCGT AAAAAATGGC GGGAGCATCT CAGCGGGCGG CGTAACTGGC AATATCCCCT GTGGTGCGTC TTGATGTTTC AAGCTTGGTT AGATGCTCAG TAA
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Protein sequence | MCGFAGFYDS SLPVDQAGEI LTKMASELIH RGPDDEGIWC ERETGIHFTH RRLAVVDLSA SGHQPMLSAS GRYVIVFNGE IYNYKALRTE LEGRETQWHG YSDTEVLLAG IEAWGVSKTL QRCVGMFALA LWDRKARVLY LARDRLGEKP LYYGWMKGAF LFGSELKALR AYPFWQGEID RKAVTLLMRH NYIPSPFSIY QGIYKLPPGC FLALSWESLR VNKALAPFPQ EGERSVLQPY WSAWKAVENG VTVPFRGSDK EAIAELEKRL RDAVVGKMVA DVPLGAFLSG GIDSSTVAAL MQAQSSQPIR TFSIGFHEEG YNEAVHAAQV AHHLGTDHTE LYISPEEAMA VIPRLPSIYD EPFADSSQIP TFLVSQLARR HVTVALSGDG GDELLGGYNR YFWCKQIWNK AGRFPRLGRQ LAAQMLGALP PSVWDKVFAS LDPILPARFR QAHPGDKLHK LAAILASDSP AVIYEQLISQ WQNPGSIVIN GFEPSGSANK VWSYPALTNL TERMMFLDLI TYLPGDILTK VDRASMAVSL ETRVPLLDHR LVEFAWRLPL GLKVRAGTGK WILRQVLYRY VPEALVERPK MGFGVPIDAW LRGPLRHWAE DLLDASKLRR EGYFYPEPIR KKWREHLSGR RNWQYPLWCV LMFQAWLDAQ
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