| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2471 |
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| Symbol | |
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| ID | 3704609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2815892 |
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| End bp | 2817655 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738950 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_344454 |
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| Protein GI | 77165929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.926493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC CACGGCGACG TTTTGATACG CTGGTTATTG GTGCTGGTGG GGGAGGACTC
CGGGCGGCTC TACAGTTGGC CGAGGCGGAA GCCAATGTGG CCGTGGTCTC TAAAGTCTTT
CCTATTCGTT CCCATACTGT CGCTGCCCAA GGGGGAATGA ATGCCGCGCT TGCCAATGTG
TCGCCGGATA GCTGGCACTG GCATATGTAC GATACAGTTA AGGGAAGTGA TTATCTGGGG
GATCAGGATG CTATCGAGTA TATGTGTCGG GCCGCTGCTC ATTTAGTGAT TGATCTGGAA
CATGCGGGGG TTCCGTTTTC ACGGTTGGAG AATGGGAAAA TCTATCAACG GGCTTTTGGA
GGGCAAAGCC AGAATTTTGG GGGCGAGCAA GCTGCTCGAA CTTGTGCCGC AGCTGATCGC
ACCGGCCATG CCATCCTTCA TAGTCTTTAT CAGCAAAATA TCAAGTCTAA AACTCATTTC
TTTGATGAGT TTTTTGCCCT GGATCTGATT AAAGATGCCG AGGGTTATAT TTTGGGTGCT
GTGGTACTGG AGATAGAAAC GGGCCAGCCC TGGATTATTG AAGCTAAATG TACCTTATTA
GCCACCGGGG GAGCAGGGCG GCTTTTCCGC ACTAATACAA ATGCCCGCAT CAATACGGGC
GATGGTATGG CTATGGCTTT GCGTGCCGGG ATTCCGCTGC AGGATATGGA GTTTGTCCAA
TTTCATCCCA CCGGTATCGC GGGCAAGGGA ATGCTTATCA CAGAAGGAGT ACGGGGAGAA
GGTGGCTATC TGGTTAACTG CGAAGGGGAG CGTTTCATGG AGCGTTATGC CCCCCATGTC
AAGGATCTTG CGAGCCGAGA TGTGGTTAGC CGTGCTATTT ATACTGAAGT GAAGGAAGGA
CGCGGATGCG GCCCCGACGG TGATTATGTC TTGCTCAAAT TGGAGCATTT AGGGGCAAAT
ATTATCAAGG AACGTTTACC GGGCATCCGG CAAACCGTTT TGACTTTTTT GCATTTTGAC
CCTATCGAAC AGCCTATTCC GGTCTATCCC ACCTGCCATT ATGTGATGGG AGGTATTCCT
ACCAACCGTT TCGGGCAAGT AGTAGCTCCC TATAATGAGG GAGCCGAAGA GGCTATCCCT
GGATTATATG CAGTGGGGGA ATGTGCTTGT GTTTCCGTCC ATGGGGCTAA TCGCCTGGGG
GGGAATTCGT TGCTGGATAT AGTGGTATTC GGGCGTGCCG CAGGTAATCA TATTATTGAG
CACCTGGAAG CACATCGCTA TCATCGGGCC TTGGCTTCCG AGAGTGTGGA GCAGGCTTTG
GAGCGTTTAG CCCGCTGGGA GCGTCCTGGT GATGGGGAAA GTGTGGAGGA ATTACGCGCT
GATCTGCAAA AATTTATGGA ACAAAATTGT GGCGTATTCC GCAATGAAGC CGTGCTTGAA
GAGGCTGTTC ATAAGGTAAC GGAGATTGAG GAACGGTTGC AGTATGTACG TTTGAAGGAC
CAGAGTAAAA TTTTTAATAC TGCCCGGCTT GACGCGTTAG AACTGGAAAA TTTAGTGGGG
CTAGCACAAG CGGTAGTCCG TTGCGCCCTT GCGCGGCAGG AGAGTCGAGG CGCCCATTAC
CGGGTAGATT ATCCGGAACG GGATGATATC CGTTGGCTTA AACACTCCTT GTATTTCCAA
GGACAAGGGC ATGTGGAATA CAAGCCAGTA CGATTAAAGC CTTTGACCGT GGATACCTTT
CCTCCAAAAG AAAGAGTTTA CTAA
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| Protein sequence | MNLPRRRFDT LVIGAGGGGL RAALQLAEAE ANVAVVSKVF PIRSHTVAAQ GGMNAALANV
SPDSWHWHMY DTVKGSDYLG DQDAIEYMCR AAAHLVIDLE HAGVPFSRLE NGKIYQRAFG
GQSQNFGGEQ AARTCAAADR TGHAILHSLY QQNIKSKTHF FDEFFALDLI KDAEGYILGA
VVLEIETGQP WIIEAKCTLL ATGGAGRLFR TNTNARINTG DGMAMALRAG IPLQDMEFVQ
FHPTGIAGKG MLITEGVRGE GGYLVNCEGE RFMERYAPHV KDLASRDVVS RAIYTEVKEG
RGCGPDGDYV LLKLEHLGAN IIKERLPGIR QTVLTFLHFD PIEQPIPVYP TCHYVMGGIP
TNRFGQVVAP YNEGAEEAIP GLYAVGECAC VSVHGANRLG GNSLLDIVVF GRAAGNHIIE
HLEAHRYHRA LASESVEQAL ERLARWERPG DGESVEELRA DLQKFMEQNC GVFRNEAVLE
EAVHKVTEIE ERLQYVRLKD QSKIFNTARL DALELENLVG LAQAVVRCAL ARQESRGAHY
RVDYPERDDI RWLKHSLYFQ GQGHVEYKPV RLKPLTVDTF PPKERVY
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