Gene Noc_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2445 
Symbol 
ID3704602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2790115 
End bp2790741 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID637738925 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_344429 
Protein GI77165904 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAG GAGTTCCTCA AGCAACTGTA TTTGTTGATG ATGATGATGA GGGGGTGCGA 
GATTCTCTGC GCTGGGTTAT CGAATCAGCA GGGTTTAAGG TCAAAGTTTA TGCTTCGGCA 
GGGGAGTTTT TGGAGAAATG GGAGCCCAGC CAGCCAGGTT GCCTGGTGCT TGATGTCAGG 
ATGCCTGAAA TAAGCGGATT ACAGCTGCAG AAATTACTTT CTAAAAAAAA TAACCTATTG 
CCCATTATTT TTATTTCCGC CCATGGGAGT GTACCGGATG CGGTGAGTGC ATTGCATGAT 
GGGGCGGTCG ATTTTCTTGT GAAACCTTTC GATAATCAGA TCCTGATAGA GCGAATTCAA 
AGCAGCCTTG ATATGGATAG AAGGAAGCGT GAAAGGAGGC AACAGCGAGA GAAGATTGCT 
CATCGGATGA CCCAGTTGAC CGCTCGCGAG CGCCAGGTAA TGGATCTTAT CGTGATGGGG 
AAAGCGAATA AAGTGGTGGC CATGGAGCTG GGAATCAGTA CTAAAACCGT TGAGATCCAT 
CGCTCCCGGG TGATGGAGAA ACTGGCGGCC AGAAATCTGG TGGAGCTGAT CCATCTAACT 
CGTTTTTTGC AGAATGGAGA CGACTAA
 
Protein sequence
MEKGVPQATV FVDDDDEGVR DSLRWVIESA GFKVKVYASA GEFLEKWEPS QPGCLVLDVR 
MPEISGLQLQ KLLSKKNNLL PIIFISAHGS VPDAVSALHD GAVDFLVKPF DNQILIERIQ 
SSLDMDRRKR ERRQQREKIA HRMTQLTARE RQVMDLIVMG KANKVVAMEL GISTKTVEIH 
RSRVMEKLAA RNLVELIHLT RFLQNGDD