Gene Noc_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2424 
Symbol 
ID3704993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2771165 
End bp2771656 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID637738905 
Productferric-uptake regulator 
Protein accessionYP_344410 
Protein GI77165885 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.688654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATA CTAATATCCT AGTCCCCTTT AAGGGGCCTA GCCACGATCA CTGGCGTTGT 
ATCCGGAATG CGCTGGCTGT AGCGGAAAAA ACCTGTGCTA GCCGAGGATT GCGGCTGACC 
AAGCTGCGGC GCCGGGTTTT AGAATTAATA TGGGATCGCC ACGAGCCAGC TAAGGCGTAC 
GATATTCTCG AACAGCTGCG CCAGGAGCAT CAGGCCGCTG CTCCTCCCAC TGTGTATAGA 
GCCCTGGATT TTCTGCTCCA GACAGGTTTG ATTCACCGGG TGGAAACCCT CAATGCTTAT 
GTAGGCTGCG GCGATCCGGA TCGGCTTCAC ATTGGACAAT TTTTGTTATG CCGACGGTGC 
GGTACCGTAG CTGAATTGGA CGCGCCTGAG ATTACCGGGA TTATTACTAG GGAAGCGAAA 
TATTTAGGTT TTCGAGTGGA TCGTCAGACT GTAGAAATTA GGGGATTATG CCCTCAGTGT 
AGTGGGGATT AG
 
Protein sequence
MSHTNILVPF KGPSHDHWRC IRNALAVAEK TCASRGLRLT KLRRRVLELI WDRHEPAKAY 
DILEQLRQEH QAAAPPTVYR ALDFLLQTGL IHRVETLNAY VGCGDPDRLH IGQFLLCRRC 
GTVAELDAPE ITGIITREAK YLGFRVDRQT VEIRGLCPQC SGD