Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2416 |
Symbol | |
ID | 3704985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2762350 |
End bp | 2763120 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637738897 |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_344402 |
Protein GI | 77165877 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAA ACCTTGTGAA TAAAATGGGG GTAGGACGTC ATCTCAGCCG ACGAGAGATG CTCCTTCTAA CTGGCGTCAC AGCCGCCTCC CTGGTGATGG GAAGGCACGT ACGTGGGCAA TCCGCCCCTG GAGCGCCAGC ACAGATACCG GATAAGAGGG CAATGCCTTC CTGCGTGGTG AGACCCCAGC AAACGGAAGG CCCCTATTTC GTGGATGAGA AGCTCAAACG CTCCGACATT CGCTTCGAGC CCTCGGACCA TTCGGTGAAA GAGGGCGTTC CGTTGCGCCT GGTGTTTCGC GTCTCCCGGA TAGAGGGTAG CGCTTGTACG CCACTGAGTG GCGCCATGGT GGATGTTTGG CAATGTGACG CGCTGGGCGT TTATTCGGAT GTTCAGGACA TCAACGGGTT ATTCGATACC CGGGGGAAGA AGTTTTTGCG AGGATATCAA ATCACGGATG CCAGCGGGAA AGTGGAGTTC GTCACTATTT ATCCGGGATG GTATCCGGGC AGAACCGTCC ATATCCACTT CAAGATTCGC ACCGATCCTG CCTCGCCACG GGGCCATGAA TTTACCTCCC AGCTTTACTT CGACGACTCC CTCACGGATC GAGTGCACGC GCAGGCGCCC TACGCCACAA GAGGGCAGCG CACTTTGAGG AACGCGGGCG ATCGGATCTT CCAAGGGGGA GGCAACGAGC TGATACTGCC GCTCGCCAAG GAGGCCGCAG ACTACGCCGG AACGTTCGAT ATCGGACTTC AGATGACCTG A
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Protein sequence | MKRNLVNKMG VGRHLSRREM LLLTGVTAAS LVMGRHVRGQ SAPGAPAQIP DKRAMPSCVV RPQQTEGPYF VDEKLKRSDI RFEPSDHSVK EGVPLRLVFR VSRIEGSACT PLSGAMVDVW QCDALGVYSD VQDINGLFDT RGKKFLRGYQ ITDASGKVEF VTIYPGWYPG RTVHIHFKIR TDPASPRGHE FTSQLYFDDS LTDRVHAQAP YATRGQRTLR NAGDRIFQGG GNELILPLAK EAADYAGTFD IGLQMT
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