Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2359 |
Symbol | |
ID | 3704799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2703410 |
End bp | 2705113 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637738842 |
Product | flagellar FliF M-ring protein |
Protein accession | YP_344347 |
Protein GI | 77165822 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATA CTAACACTAG TAGTAATCCA CCTGCTGTTA CTTCGGAAGC ATTGCCGGTT GCCAGTACGC GTTTAGCCGC ATTGCAAGCT AATATAGGCC GCTTGTCTTT ACAGAAGCAA GTAGGGCTAT TGCTAGCCAT CGCCGCTAGC GTGGCGCTTG TGGTAGGCAT CTTTATGTGG TCTTGGGCGC CTACTTACCA AGTTATGTAT GGTGCCGTGA CGGGCAAGGA GAAAGGGGAG ATCGTTGCGG CACTGCAAAA GGCGAATATT GAATACCGGC TAGCGGAAAA TACCGGGGCA ATTATGGTGC CGGCTTCCAA AGTGCATGAG GTGAGGCTGC AATTGGCGAT GGAAGGGTTA CCGCGCAGTG CCGACACGGG TTTTGAACTC TTAGAGCAGA ATCCAGGTTT TGGCGCTAGT GAGTTTCTGG AGAAGGCCCG TTATCAGCGG GCCTTGGAAG GGGAGTTGGC CCGGACCATC GGTGCCTTGA ATAATGTTAG AAATGCTCGA GTCCATTTGG CGTTACCGAA GCAATCCGTT TTTATCCGTA ATCGCAGAGC GCCTTCAGCT TCGGTAGTTT TGGATCTCTA TGCCGGACGC ACGCTTGATC CCGGGCAAGT GGCCGCGATC ACCCACTTAG TTGCTTCCAG TATTCCCAAT TTGGAGAGTA GTGGTGTAAC GTTGGTGGAT CAAAGAGGCA ATTTGCTGAC CCGGCAAGAC CGTTCCCAAT CTCTGGGGAT GACAGAGGGC CAATTCGAGC ATACCCGGCG TTTAGAAGAG AAATATATTA GCCGAATCCA GCATATTCTA GCCCCTATGA TCGGCTCCAA TAAGGTTCGG GCCCAGGTGG TTGCCGAGGT GGATTTTACG GTCACGGAAC AAACCCAAGA ATACTATAAT CCCGGATCGG CCGCTTTGCG CAGTGAGCAG ATGTCGGAGG AGGAGCGCAC TGGGAGCCGT CTTCCCCAGG GAATTCCGGG AGCACTGAGC AATCAGCCGC CGGCTGATGC CCAAGCACCC GAAACTGTTC CAGAGGCTAA CGGCGATGAA GCCCAGATAG AACCCGTCCC CACAACGCGC AGTCAAAGGG CCACGCGGAA CTACGAACTG GACCGCACTA TCAGCCACAG CCGGTTAAGC CCTGGATCTA TTCGGCGTCT TTCAGTGGCT GTCCTGGTGG ACGAGAAAGC GGTGACGGAT GCTGAAGGCG CTGTCAGCAC TTTGCCTCGT TCACCCCAGG AGCTTGCCCA GGTGACCGCC CTGGTGAAAG AAGCCGTGGG TTTTAATGCC GAGCGAGGTG ATACCATTAA TGTGATTAAT GCCCCTTTTG TACCAGCTAA CGAGGAGGAA GCCTTCCCAG AGCTTTCCCT TTGGCAGCAG GATTGGTTTT GGCAAGCCGT CAAACAGGGG GGAGGTATTT TAGCTATATT GCTTTTGTTG CTGGGAGTAT TGCGCCCCGC TTTTCGCCGG CTGACCGCTT TACCTGAGCC TGTAGCTCTG TCTGCCATCC CCAACAAGGA CGAAGAGGAA AGTGATGACG GACTACAAGA GGATCAACTA AGCCTGAGCA GTAATAAACC AACCCTTCAG CTATCAGGAC CCCATTCGTT GGAAGCGAAC TTGGAGATTG TTCGTGAAAT GGCCACCGGT GACTCTAGAC GTGTGGCCCA GGTTGTAAAA AACTGGTTGG TCAGTGATGT CTGA
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Protein sequence | MADTNTSSNP PAVTSEALPV ASTRLAALQA NIGRLSLQKQ VGLLLAIAAS VALVVGIFMW SWAPTYQVMY GAVTGKEKGE IVAALQKANI EYRLAENTGA IMVPASKVHE VRLQLAMEGL PRSADTGFEL LEQNPGFGAS EFLEKARYQR ALEGELARTI GALNNVRNAR VHLALPKQSV FIRNRRAPSA SVVLDLYAGR TLDPGQVAAI THLVASSIPN LESSGVTLVD QRGNLLTRQD RSQSLGMTEG QFEHTRRLEE KYISRIQHIL APMIGSNKVR AQVVAEVDFT VTEQTQEYYN PGSAALRSEQ MSEEERTGSR LPQGIPGALS NQPPADAQAP ETVPEANGDE AQIEPVPTTR SQRATRNYEL DRTISHSRLS PGSIRRLSVA VLVDEKAVTD AEGAVSTLPR SPQELAQVTA LVKEAVGFNA ERGDTINVIN APFVPANEEE AFPELSLWQQ DWFWQAVKQG GGILAILLLL LGVLRPAFRR LTALPEPVAL SAIPNKDEEE SDDGLQEDQL SLSSNKPTLQ LSGPHSLEAN LEIVREMATG DSRRVAQVVK NWLVSDV
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