Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2329 |
Symbol | rpsL |
ID | 3704728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2669099 |
End bp | 2669473 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637738808 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_344317 |
Protein GI | 77165792 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000396371 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCA TTAACCAATT GGTTCGTAAG CCGCGGGTAC GGCAGAAGCA AAAAAGCAAT GTACCCGCGC TGCAGGCTTG TCCCCAAAAG CGAGGGGTCT GTACTCGAGT CTATACTACT ACGCCAAAGA AGCCTAACTC GGCCATGCGT AAGGTGGCCC GTATACGTCT CACTAATGGT ATGGAAGTCA CCTCTTATAT CGGAGGTGAA GGGCATAATT TGCAAGAGCA CTCTGTGGTT CTAATTCGTG GCGGTCGCGT CAAGGACTTA CCTGGCGTGC GCTATCACAT CGTACGGGGA TCTTTAGATA CAGCAGGTGT GGGGGATCGT CGGCAAGGCC GCTCCAAGTA CGGGGCTAAA CGGCCAAAGG GGTAG
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Protein sequence | MATINQLVRK PRVRQKQKSN VPALQACPQK RGVCTRVYTT TPKKPNSAMR KVARIRLTNG MEVTSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG SLDTAGVGDR RQGRSKYGAK RPKG
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