| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2318 |
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| Symbol | rpsC |
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| ID | 3704544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2661064 |
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| End bp | 2661735 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637738797 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_344306 |
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| Protein GI | 77165781 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000695636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGCAAA AAGTACATCC TACTGGGATC CGTCTAGGCA TTGTTAAGGA TTGGAACTCT
AAATGGTATG CGGATAGCGG CCAATTTAGT GAGCTGCTGA ATAATGATTT AGCAGTTCGT
AGCTACCTTG CCAAGAAGCT ATCCCATGCG CTAGTGAGCA ATATTCAGAT TGATCGGCCG
GCGCGTAATG CTCGGATCAC TATTCATACC GCTCGTCCAG GTATCGTCAT TGGAAAAAAG
GGTGAGGATA TTAACAACCT ACGGCAAGAA GTCTCAAGAA TGATGGGTAT ACCCGTTCAT
ATTAACATTC AAGAGATACG CAAGCCTGAA TTAGACGCAA CGCTTGTTGC TGCAAATGTG
GCTCAGCAAC TCGAACGGCG AATTATGTTT CGCCGAGCAA TGAAGCGTGC GGTTACCAAC
GCTATGCGTG TAGGTGCGCA AGGTATTAGG ATAAAAGTCT CCGGGCGCTT AAATGGGGCA
GAGATTGCAC GTAACGAATG GTATCGGGAA GGCCGGGTAC CATTGCATAC GTTACGCGCT
GATATAGATT ATGGTTTTGC TGAGGCGAAG ACTACCTATG GAATCCTTGG CGTTAAGGTA
TGGATATTTA AGGGCGAAGT ATTTGAGCAG CCGGAGCCGC AGGTCGCCGC GGGAAGCTCA
GCGATAAGCT AG
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| Protein sequence | MGQKVHPTGI RLGIVKDWNS KWYADSGQFS ELLNNDLAVR SYLAKKLSHA LVSNIQIDRP
ARNARITIHT ARPGIVIGKK GEDINNLRQE VSRMMGIPVH INIQEIRKPE LDATLVAANV
AQQLERRIMF RRAMKRAVTN AMRVGAQGIR IKVSGRLNGA EIARNEWYRE GRVPLHTLRA
DIDYGFAEAK TTYGILGVKV WIFKGEVFEQ PEPQVAAGSS AIS
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