| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2312 |
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| Symbol | rplE |
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| ID | 3704538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2658841 |
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| End bp | 2659386 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637738791 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_344300 |
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| Protein GI | 77165775 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000116558 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGGT TGCAAAAACA TTATCGGGAT ACGGTTATTA ACCAGTTACG GGAGCGTCTT
GGTTGTCAGT CGGTTATGGC AGTGCCCCGA ATCGAAAAGA TTACCTTGAA TATAGGGGCT
GGAGAGGCGG TCGGAGATAA AAAAATCTTG GAGCGAGTAA TGGGTGATAT GGCTAGGATT
TCTGGCCAGA AACCGGTGCT CACCCGTGCA CGCAAGTCGG TAGCCGGATT TAAAATCCGG
GAGGATTGGC CTATCGGTTG TAAAGTCACC TTGCGCCGCA AGCAAATGTA CGAATTTTTA
GACCGGCTAA TTAATATAGC GATTCCTCGA ATTCGGGACT TCCGTGGACT TAGTCCAAAG
TCTTTTGATG GGAGGGGTAA CTATAATATG GGTATTCGTG AGCAGATTAT TTTCCCAGAG
ATCGACTATG ACCAGATCGA TGCTATAAGG GGAATGAATA TCACGATAAC AACTACAGCA
AAAACGGATG AGGAAGGCCA AGCATTGCTT AGAGCATTTA ATTTTCCGTT TAGAACTCAT
ACTTAG
|
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| Protein sequence | MARLQKHYRD TVINQLRERL GCQSVMAVPR IEKITLNIGA GEAVGDKKIL ERVMGDMARI
SGQKPVLTRA RKSVAGFKIR EDWPIGCKVT LRRKQMYEFL DRLINIAIPR IRDFRGLSPK
SFDGRGNYNM GIREQIIFPE IDYDQIDAIR GMNITITTTA KTDEEGQALL RAFNFPFRTH
T
|
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