Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2283 |
Symbol | |
ID | 3704489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2635441 |
End bp | 2637327 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637738762 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_344271 |
Protein GI | 77165746 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0415043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGGAA ATTACGATGC TGCCGCGATA GAAGTACTCA CGGGCTTGGA TCCGGTACGC AAGCGGCCAG GAATGTATAC CGATACCCAA CGGCCTAATC ATTTGGCTCA GGAGGTCATT GATAATAGCG TCGATGAGGC CATTGCAGGA TTCGCTACCC AGATCGATGT CGTGCTTCAA CCAGATGGTT CCTTAACAGT GTGTGATGAC GGACGGGGAA TGCCAGTGGA TCTGCATCCA GAGGAGCGGT TGCCAGGAGT AGAGGTGATT CTTACCCGAC TCCATGCGGG TGGTAAATTC TCTTCTAAAA GTTATCGCTT CGCGGGAGGG TTGCACGGGG TAGGGGTTTC GGTGGTGAAC GCCCTTTCCT CGCGCCTGGA GGTTTGGGTG CGGCGCGAGG GCTGTGAATA TCATATCGCT TTTGCTAATG GTGAACGGGT TTCCGCTTTA AAAGCGATCA ATAAGGTAGG TAAGCGCAAT ACGGGCACCG TTCTGCGTTT CTGGCCAGAT CCGGTATTTT TCGATACCCC TAAATTTGCT GTGGCGCGGC TTAAGCATAT TTTACGCGCC AAAGCGGTGC TATGCCCCGG TCTTTGCGTG ACCTTCAGCG ATGTTGCTAC CGGAGAGACG GTCAATTGGC GTTACCAAGA GGGACTTTTA GCTTATCTCA GAGATGAGTT AAGAGAGCTC TCGTACTTGC CTGACCCCCC TTTTACCGGA GAAATGCAAG GTAATACTGA AGAAGTCTGT TGGGCGTTTA CTTGGTTGCC TGAAGGGGGC GAGGTGGTGA CGGAAAGCTA CGTTAATTTG ATTCCAACGC CCCAGGGAGG CACTCATGTC AATGGCTTGC GGGCGGGGAT GCTGGAGGCA GTGCGAGAGT TTTGTGAGTT TCGGAATCTT CTGCCAAAGG GCGTAAAACT GGCCCCGGAT GATGTTTGGG ATCGAGTGAG TTATGTGCTT TCGGTGAAGC TTCTCGACCC TCAGTTTTCT GGGCAAACTA AAGAACGCTT GTCTTCTCGG GAATGCGCTA GTTTTGTTTC TGGAGTTGTC AAAGATTCTT TTAGTCTATG GCTTAATCAG CATGTCGTCA CTGGAGAGAC GATTGCAGAA TTGGCGATTG GCAATGCCCA GCGGCGTTTA CGCCAGGCCA AAAAAGTGGT TCGCAAGCGT ATTCAAGCTG GCCCTGCACT GCCGGGAAAA TTAGCGGACT GCACCAGTCA GGAGGTAAGT CTTACGGAGC TTTTTCTGGT GGAGGGGGAT TCAGCCGGCG GCAGTGCGAA ACAGGGGCGG GACCGGGTAT TTCAAGCTAT CATGCCCCTT CGTGGGAAAA TCCTCAATAC TTGGGAGATA GATTCAGCCC AGGTGCTGGC TTCCCAAGAA GTGCATAATA TTGCGGTGGC GCTGGGTGTA GATCCTGGCT CGGATAAACT TGATAGCTTA CGCTACGGTA AAATCTGTAT TCTTGCTGAT GCCGATTCCG ATGGCGCCCA TATTGCCGCC TTACTTTCGG CGCTATTCTT TCGGCATTTT CGGCCGCTGG TTGAGGCGGG CCACATTTAT GTGGCGATGC CACCCCTTTA TCGCATCGAT GTCGGGAAGC GCGTTTTCTA TGCCCTTGAC GAGGCGGAAC GACAAGGAGT GCTCGATCGG ATTGCTGCTG AAAGAATTAA AGGAAAAATT AATATCCAGC GTTTTAAAGG ATTGGGAGAG ATGAATCCCA TGCAGTTGCG GGAGACTACC ATGGCGCCAG AGACGCGACG ATTAGTGCGT TTGACGGTGA CTCCTAATGA TGATCCGGAC CAGTTGCTGG ATCGGTTGTT AGCCAAGCGC CGCGCTGCGG ATCGCAGGCG ATGGCTGGAA GAAAGCGGTA ATTTAGCCGA GCTATGA
|
Protein sequence | MSGNYDAAAI EVLTGLDPVR KRPGMYTDTQ RPNHLAQEVI DNSVDEAIAG FATQIDVVLQ PDGSLTVCDD GRGMPVDLHP EERLPGVEVI LTRLHAGGKF SSKSYRFAGG LHGVGVSVVN ALSSRLEVWV RREGCEYHIA FANGERVSAL KAINKVGKRN TGTVLRFWPD PVFFDTPKFA VARLKHILRA KAVLCPGLCV TFSDVATGET VNWRYQEGLL AYLRDELREL SYLPDPPFTG EMQGNTEEVC WAFTWLPEGG EVVTESYVNL IPTPQGGTHV NGLRAGMLEA VREFCEFRNL LPKGVKLAPD DVWDRVSYVL SVKLLDPQFS GQTKERLSSR ECASFVSGVV KDSFSLWLNQ HVVTGETIAE LAIGNAQRRL RQAKKVVRKR IQAGPALPGK LADCTSQEVS LTELFLVEGD SAGGSAKQGR DRVFQAIMPL RGKILNTWEI DSAQVLASQE VHNIAVALGV DPGSDKLDSL RYGKICILAD ADSDGAHIAA LLSALFFRHF RPLVEAGHIY VAMPPLYRID VGKRVFYALD EAERQGVLDR IAAERIKGKI NIQRFKGLGE MNPMQLRETT MAPETRRLVR LTVTPNDDPD QLLDRLLAKR RAADRRRWLE ESGNLAEL
|
| |