Gene Noc_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2277 
SymbolileS 
ID3705069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2626061 
End bp2628883 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content54% 
IMG OID637738756 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_344265 
Protein GI77165740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAAAT ATAAAGAGAC TCTTAATCTC CCTAAGACCG CCTTTCCCAT GAAGGCTAAT 
CTGGCCCAGC GTGAACCCCA GGCGCTCAAG CGGTGGCAAG CAATGGACCT GTATGGGAAG
CTGCGGAATG CAGCGCGTGG CCGACCCCGC TTTATTCTCC ATGATGGCCC TCCCTATGCC
AATGGCGCTA TTCATATTGG CCATGCCGTC AACAAAATAT TAAAAGACAT TATAGTGAAA
TCAAAGTCCC TGAGTGGTTT TGATGCCCCC TATGTTCCCG GCTGGGATTG TCATGGCCTG
CCTATTGAAT TGAATGTAGA AAAAAAAGTA GGTAAACCGG GGCGAAAAAT CGATGTAGCC
AGCTTCCGTC GGGCCTGTCG GGATTACGCC CGCAAGCAAG TCAATGCTCA GCGCGAGGAC
TTTGAGCGCC TGGGGGTATT GGGGGATTGG TGTCATCCCT ATCTCACCAT GGATTACCAG
TTCGAGGCGG ATGTTATCCG CACATTAGGG AAGATCATCG AGAAGGGGCA TCTGCATAAG
GGGGTGAAAC CCGTCCATTG GTGCGTGGAT TGTGGCTCCG CTCTAGCAGA AGCGGAAGTC
GAGTATCAAG AGAAAACTTC ACCGGCGATC GATGTCCGTT TCCCAGTAGT GGAGGAGGTG
GAGTTGCTGG CCCGCTGCAA AGCGGAAATT CCAGGCGCCG GACCCATGAG CGTGGTGATT
TGGACTACCA CCCCTTGGAC ATTGCCGGCC AATCAAGCTG TCGCCTTACA TCCCGCTTTG
AAATATGTTT TGGTAGAATG CAGCGCCGGT CAGGGCCGGG AGCGCCTGTT ACTAGCCGAA
GGCTTATACC GGGAAGTATT GGCCCGCTAT AGCGCGGAGT CCGCCGTGAT TTTAGCGACT
TGCCAGGGAG ACGAACTGGA AGGGTTGAAA TTACAGCATC CGTTTTATGA GCGGACGGTA
CCGATCATCC TGGGGGAGCA TGTCAATTTG GAAGCAGGGA CAGGGGCTGT CCATACGGCG
CCGGGCCATG GCCAGGACGA TTACGTGGTT GGCAATCGCT ACCAGTTATC CATCGATAAT
CCCGTGGGTG GAAATGGTTG TTTTTTGCCG GAAACGCCCT TGTTTGCCGG CGAGCCGGTA
TTCAAAGCCA ACGATCACAT TATTCAAGTC CTCAAGGAAC GAGGGAATCT GCTCCGGGAG
CAGAGCCTTC AGCATAGCTA TCCCCATTGT TGGCGTCATA AAACTCCCAT TATTTTTCGG
GCGACACCCC AATGGTTTAT CAATATGGAG CGGGAAGGTT TGCGCACCGC GGCTCTTGCG
GAAATCAAAA AAACCCGCTG GCTTCCTGGC TGGGGCCAGC AACGGATTGA AGGTATGGTG
GAAAATCGGC CCGACTGGTG TATTTCTCGC CAGCGGGCTT GGGGAACCCC CATCCCCTTG
TTTGTCCATT GCCAAACCGG CGAACTGCAC CCGGATACCC CCCGGCTTAT GGAAGAAGTG
GCCCGACGGG TAGAAGAGAA GGGGATAGAG GCTTGGTTTG AGCTGGAGCC GAAGGAGTTG
CTGGGCAATC AGGCCCCGGC CTATGAGAAG GTCGGCGATA CCCTGGACGT TTGGTTTGAT
TCCGGGGTGA CTCATACCTG TGTTCTGGAG ACGAGGGAAG AACTGGGTGT GCCTGCCGAT
CTCTATTTGG AGGGCTCTGA TCAGCATCGA GGTTGGTTTC AATCGTCCTT GTTGACCTCG
GTAGCGATAC GGGGTACGGC GCCTTACCGG ATGGTGCTGA CCCACGGCTT TACCGTGGAT
GCCAAGGGTA AGAAGATGTC TAAGTCCCAG GGTAATGTCG TGGCGCCGCA ACAAGTAATG
GGGAGTTTGG GGGCGGATAT CCTTCGCCTG TGGGTGGCGG CTACCGACTA TCGGGGCGAG
ATGAATGTCT CGGATGAAAT CCTGAAGCGT ATTGCCGATT CTTATCGCCG CATGCGCAAT
ACTGCCCGTT ATCTGTTGGC TAATTTGAAT GGTTTTGATC CAACCATCCA TGGGGTGCCA
GCTAAAGACA TGCTGGCTCT GGACCGTTGG GCACTAGATC GAGCCTCTTT GCTCCAGGGA
GAGATTGTCC AAGCTTACGA GGATTATAAC TTCCATCTTA TTTATCAACG GGTTCACAAC
TTCTGTGCCG TGGATATGGG GGCGATTTAT CTCGATATCA TCAAAGATCG TCAATACACA
ACCCAGGCGG ATAGCCGCGC CCGGCGTTCA GCCCAGACCG CCATGTACCA CATTGCCGAA
GCCTTGGTGC GCTGGCTTGC CCCGGTGTTG AGTTTTACCG CCGATGAAAT CTGGCAATAC
CTTCCGGGCG AGCGGGGCGA ATCGGTGTTT CTAACCACTT GGTATGAAGA TTTGCCCTCC
TTGGGAGAAG AGGCCCCTTG GGGCCGTGCT TTTTGGGATG TGATACTGGC AGCGAGGGAG
GCCATCGCCA AGGTGCTAGA GGGGGTCCGG GTAGAAGGAC GAATTGGTTC TTCCCTGGAT
GCGGAGGTGG ATCTCTATGT TGAAGAGTCT CTTTATCAGG CTTTGAGGAA ACTCGGCGAT
GAACTCCGTT TTGTGCTGAT TACCTCCTAT GCTCGGGTGT ATCCAGCCCA AAAACGGCCC
GTTGAGGCCC TAGAAACTGA AATGCCCGGT CTGTGGACGG TGGTCATCCC CTCCCATTAT
CCCAAGTGCG TGCGTTGTTG GCATCACCGG GAGGAAGTAG GAAGCCACGA GGATCATCCT
GAGTTGTGTA GCCGTTGTGT GGAGAATACT GAAGGTGGGG GAGAACAGCG GGCTTTCGCT
TAG
 
Protein sequence
MAKYKETLNL PKTAFPMKAN LAQREPQALK RWQAMDLYGK LRNAARGRPR FILHDGPPYA 
NGAIHIGHAV NKILKDIIVK SKSLSGFDAP YVPGWDCHGL PIELNVEKKV GKPGRKIDVA
SFRRACRDYA RKQVNAQRED FERLGVLGDW CHPYLTMDYQ FEADVIRTLG KIIEKGHLHK
GVKPVHWCVD CGSALAEAEV EYQEKTSPAI DVRFPVVEEV ELLARCKAEI PGAGPMSVVI
WTTTPWTLPA NQAVALHPAL KYVLVECSAG QGRERLLLAE GLYREVLARY SAESAVILAT
CQGDELEGLK LQHPFYERTV PIILGEHVNL EAGTGAVHTA PGHGQDDYVV GNRYQLSIDN
PVGGNGCFLP ETPLFAGEPV FKANDHIIQV LKERGNLLRE QSLQHSYPHC WRHKTPIIFR
ATPQWFINME REGLRTAALA EIKKTRWLPG WGQQRIEGMV ENRPDWCISR QRAWGTPIPL
FVHCQTGELH PDTPRLMEEV ARRVEEKGIE AWFELEPKEL LGNQAPAYEK VGDTLDVWFD
SGVTHTCVLE TREELGVPAD LYLEGSDQHR GWFQSSLLTS VAIRGTAPYR MVLTHGFTVD
AKGKKMSKSQ GNVVAPQQVM GSLGADILRL WVAATDYRGE MNVSDEILKR IADSYRRMRN
TARYLLANLN GFDPTIHGVP AKDMLALDRW ALDRASLLQG EIVQAYEDYN FHLIYQRVHN
FCAVDMGAIY LDIIKDRQYT TQADSRARRS AQTAMYHIAE ALVRWLAPVL SFTADEIWQY
LPGERGESVF LTTWYEDLPS LGEEAPWGRA FWDVILAARE AIAKVLEGVR VEGRIGSSLD
AEVDLYVEES LYQALRKLGD ELRFVLITSY ARVYPAQKRP VEALETEMPG LWTVVIPSHY
PKCVRCWHHR EEVGSHEDHP ELCSRCVENT EGGGEQRAFA