| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2270 |
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| Symbol | |
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| ID | 3705062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2617846 |
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| End bp | 2618409 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738749 |
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| Product | putative type-4 fimbrial pilin related signal peptide protein |
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| Protein accession | YP_344258 |
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| Protein GI | 77165733 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA CAGCAGATAT CTTTAGGCAA GGAACTAACG GCTTTACCTT AGCTGAGCTC
ATCATTACCC TGGCCATCGC CGGGATTATC ACCACCATGG CGGTACCAAG TTTTCAGGGA
GCCATCAGAA ATAACCGGAT AAGCACCCAA GCTAATGAGT TCATTACCGC TTTACACTCT
GCCCGCAGCG AAGCGGTCAA GCGGAGGCAG CGCATCACCA TCTGTAAAAG TGCAAACAGC
ACCGCTGCTT CCCCCGCCTG CAATACTGTA AATTCCACCG GCTGGGACAA AGGATGGGTT
GTATTTGTCG ATGAGGATGA AGACGCAAGC CTGGATACTA CTGAGACCGT CCTCCGCATT
CATGGCCCAT TGGAAGGAGG TAATCGACTA ACAGGAAACA CCAATGTAGC TAACTACATC
TCCTACGCGG CCAACGGAAC AGCCCAACTT ACGAGCGGCG CGATTCAAAT GGGAACCATC
ACCCTTTGCC ATCCGCCCAA GGCCCGCCAA ATCGTTATTA ATAGTACGGG CCGCATTCGC
TCAGAGGAGA CCACTTGCTC ATGA
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| Protein sequence | MNRTADIFRQ GTNGFTLAEL IITLAIAGII TTMAVPSFQG AIRNNRISTQ ANEFITALHS
ARSEAVKRRQ RITICKSANS TAASPACNTV NSTGWDKGWV VFVDEDEDAS LDTTETVLRI
HGPLEGGNRL TGNTNVANYI SYAANGTAQL TSGAIQMGTI TLCHPPKARQ IVINSTGRIR
SEETTCS
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