| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2209 |
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| Symbol | prpB |
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| ID | 3705147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2552785 |
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| End bp | 2553669 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637738685 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_344199 |
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| Protein GI | 77165674 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.629465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAA ACCACAGCCC TGGCGTCCGC TTGCGGGCCG CCGCCGCAGC GGAGCGGCCC
TTGCAAGTGG CGGGAGTCAT CAACGCCTAT GCCGCGTTGC TGGCTAAACG GGCAGGTTTC
CGGGCGCTTT ATCTCTCCGG AGCCGGGGTG GCTAATGCCT CCTTTGGCCT ACCAGATTTG
GGATTGACGA CCCTTACCCA GGTAGCGGAA GAGGTTCGCC GTATCGTGGC GGTGACAGAT
TTGCCCTTAT TAGTGGACGG AGATACTGGC TGGGGAGATG GGCTTATGGT GGCCCATACC
GTGGAAACCC TGAGCCGGGC TGGGGCCGCG GGACTGCATT TAGAGGATCA AGAACAGGGC
AAACGCTGCG GTCATCGGCC AGGTAAAACC TTGGTCAGTA CCGGGGAGAT GATGGCTCGA
ATAGCGGCGG CAGTCAGGGG GCGGGTAGAC GATCAGTTTG TGATCATGGC CCGCACCGAT
GCCTACGCCG TGGAAGGTTT GGAGGCTGCA ATGGCGCGGG CGCGGTGTTA TGTAGAGGCG
GGGGCGGATA TGATTTTCGC CGAATCCTTG GGCTCCCTGG AGGAATACCG GTGTTTCGCC
CAAGCGGTGC AAGCGCCGGT GCTAGCTAAT ATGACCGAAT TTGGCCAGAC TCCCTTATTG
ACCGTTCAGG AGTTGGGAGA GGCGGGAGTC CGGCTGGTAC TCTATCCCCT CAGTGCTTTC
CGGGCCATGA GCGCGGCGGC CTTGCAAGTG TATGAGACTT TGCGCCGGGA AGGGACCCAG
CAGCGCTTAA TCGAAGGGAT GCAAACTCGG GAAGAGCTCT ATGAAATATT GGGTTACCAT
GAATATGAGC GTCAGCGGGA CGGGGCATCC GCTAAAGGAG AATAA
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| Protein sequence | MTENHSPGVR LRAAAAAERP LQVAGVINAY AALLAKRAGF RALYLSGAGV ANASFGLPDL
GLTTLTQVAE EVRRIVAVTD LPLLVDGDTG WGDGLMVAHT VETLSRAGAA GLHLEDQEQG
KRCGHRPGKT LVSTGEMMAR IAAAVRGRVD DQFVIMARTD AYAVEGLEAA MARARCYVEA
GADMIFAESL GSLEEYRCFA QAVQAPVLAN MTEFGQTPLL TVQELGEAGV RLVLYPLSAF
RAMSAAALQV YETLRREGTQ QRLIEGMQTR EELYEILGYH EYERQRDGAS AKGE
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