| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2124 |
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| Symbol | |
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| ID | 3704928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2447006 |
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| End bp | 2448205 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738600 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_344114 |
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| Protein GI | 77165589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATC CTAATCTCGA TCGGCTTCAG CCTTATCCCT TCCAGCGCCT GGCCCAGCTG
ATAAGGGAAA TCATTCCGCC ACCTTCAAAG CCTCCCCTTG CGCTTTCTAT CGGCGAGCCC
AAGCACGCTA CGCCTAACTT TATCGTCGAA ACACTCGTCA GTCACTTACA CGGCTTAGCC
ACCTATCCCA CCACCCGGGG AATAGCAGGC TTTCGAGAAG CCATTGCTGC CTGGTTAACA
CAACGATTTC ATTTGCCTAC TGGGGCAGCT GATCCTGAAC GGCATATCCT CCCTGTCAAT
GGAACCCGCG AAGCCCTATT CGCCATTGCT CACTGCGTAA TCGATTCTAG CCGAGCCCCT
TTAGTAGTCA TGCCCAACCC CTTTTATCAA ATCTATGAAG GGGCCGCTTT GCTGGCCGGT
GCTCAACCCT ATTATATTAA CTGTACTGCC GAAAACCGTT TTATCCCTGA TTATCGGGCT
GTACCTCAGC AGGTGTGGCA ACGCTGCCAG CTGCTTTATC TTTGCTCTCC TGGCAACCCC
ACCGGCGCGG TCTTAGATCT GGAAACACTC GCCGCCCTTA TTGAGCTGGC CCAGCGTTTT
GACTTTATTA TCGCTGCGGA TGAGTGCTAT TCCGAAATAT ACTTAGATGA AAGCAATCCT
CCACCGGGTC TATTGCAAGC CGCCATCCAC ATTGGCTTAG ATGATTTTCG CCGCTGCTTA
GTATTTCACA GCCTCTCCAA GCGCTCTAAT GGACCTGGAC TACGCTCCGG TTTTGTCGCT
GGCGATGCTC ACCTCATCGA ACAATTCTTG CGCTACCGCA CCTATCATGG CTGCGCTATG
CCCCCCGCAA CGCAAGCCGC CAGCATGGCT GCCTGGAATG ATGAGCGCCA TGTGATAGAA
AATCGCCACC GCTACCGAGA AAAATTCGCT GCAGTTCTCG AAATCCTAGG CTCTGAAATT
TCCTGCTCGC TACCCAAGGC AAGTTTTTAT TTATGGCCGG AAACTCCGAT TCCCGACACT
GATTTTGCCC AGCAGCTATA TCAGCGAGAA AATATTTTGA CTCTTCCCGG ACGTTTTCTC
GCCCGGGAGG CCCACGGCAC CAACCCCGGA GAGCAGCGAA TCCGCTTGGC TCTCGTCGCA
CCCCTAGAGG AATGTGTTGA AGCCGCGTGG CGGATCAAAA ATTTTGTAAA TGCCCTGTAA
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| Protein sequence | MTNPNLDRLQ PYPFQRLAQL IREIIPPPSK PPLALSIGEP KHATPNFIVE TLVSHLHGLA
TYPTTRGIAG FREAIAAWLT QRFHLPTGAA DPERHILPVN GTREALFAIA HCVIDSSRAP
LVVMPNPFYQ IYEGAALLAG AQPYYINCTA ENRFIPDYRA VPQQVWQRCQ LLYLCSPGNP
TGAVLDLETL AALIELAQRF DFIIAADECY SEIYLDESNP PPGLLQAAIH IGLDDFRRCL
VFHSLSKRSN GPGLRSGFVA GDAHLIEQFL RYRTYHGCAM PPATQAASMA AWNDERHVIE
NRHRYREKFA AVLEILGSEI SCSLPKASFY LWPETPIPDT DFAQQLYQRE NILTLPGRFL
AREAHGTNPG EQRIRLALVA PLEECVEAAW RIKNFVNAL
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