| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2121 |
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| Symbol | nusA |
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| ID | 3704924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2443399 |
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| End bp | 2444919 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738596 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_344111 |
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| Protein GI | 77165586 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.274581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG AAATTCTGAT GGTAGTAGAC GCTGTTTCCA ATGAAAAAGG CGTAAACAAG
GAAGTCATTT TCCAGGCGAT TGAGGCGGCT CTGGCGATGG CGACTCGCAA GCGTTATCAA
GAGGATATTG CAGTGCAGGT CGTCATTGAT CGAACAACGG GCGATTACCA ATCCTTTCGG
TCTTGGGAAG TTATCGAGGA TGAGGCAGAA TTGGATGCGC CAGAGCGCCA GATGCATTTG
AGCGAAGCGT GCAAACGGGA TCCTAACGCC GAAGTGAGTG GCTTTGTGAA AGAACCCATG
GAGTCGATAG CATTTGGGCG TATTGCTGCT CAAACCGCTA AACAAGTGAT TGTTCAAAAG
GTGCGGGAGG CGGAACGGGC TAAGGTTGTT GCAGCCTACC GGGGCCGGAT TAAAGAGATG
GTCATGGGGG TGGTTAAACG CATGGATCGT GGCAACATTA TTCTGGATCT TGGAGACAAT
GCCGAGGGTA TTGTTCCTCA AGAAGAGATG ATACCTCGTG AGGCAGTCCG GCCAGGAGAT
CGATTGCGAG GCTATCTTAA GGAAGTACGA GCTGAAGGGC GAGGGCCTCA ACTAGTTATT
AGCAGGACTG CCCCGGAGCT TCTCATTGAG TTGTTCAAGT TAGAGGTTCC TGAAATCAAC
GAGAATCGTA TTGAAGTTAA GGGTGCTGCT CGGGATCCAG GCCTTCGGGC TAAAATTGCC
GTAAAAACCA ATGAAACTCG TATTGATCCG GTAGGAGCCT GCGTGGGCAT GCGGGGTTCT
AGAGTTCAAG CTGTGTCGAA TGAGCTTGCT GGTGAGCGAG TGGACATCGT GCTTTGGGAC
GAAGATCCTG CGCGCTTTGT AATTAATGCT ATGGCGCCAG CAGAGGTCGC CTCTATTGTG
GTTGATGAGG AGCGCCATAG CATGGACGTT GCTGTGGCCG AGGGGAATCT CTCTCAAGCT
ATTGGCCGTG GAGGGCAGAA CATACGTTTG GCTAGCCAGC TGACCGGCTG GGAGTTGAAT
GTAATGACGG AACAAGAAGC AGAAGAAAAA GGTGAAAGCG AAGCAAAGTC GCTCCAGCAG
ATGTTTATGG AACAGTTAGA TGTGGATGAG GAAGTGGCGG CTATCCTAGT ACATGAAGGT
TTTTCTAGTA TCGAAGAAAT GGCCTATGTG CCGGAACAAG AGATTCTTGC TATAGAGGAG
TTTGACTCCC AAATCGTTCA GGAACTACGT AATCGAGCCC GTGACGTTCT TCTTACTCGA
GCAATTGCTA ATGAAGAGAC TATTGAGACC GTACAGCTAG ACCAGGAATT ATTGGACATG
GAAGAGATTG ACCATGGATT AGCCTCTGCA CTGGCCAGCA AAGGTATTGT AACTAAAGAA
AATTTGGCGG AGCAGGCGGT GGATGAACTC ATGGAGATCG AGGGGATGAA CAGAGAGAAA
GCTGCTCGTC TCATTATGGC AGCACGAGAG TCCTGGTTTG TTAGCGAGAA ACAGGATGAA
GAAACGGAGG AGCGGCAATG A
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| Protein sequence | MNKEILMVVD AVSNEKGVNK EVIFQAIEAA LAMATRKRYQ EDIAVQVVID RTTGDYQSFR
SWEVIEDEAE LDAPERQMHL SEACKRDPNA EVSGFVKEPM ESIAFGRIAA QTAKQVIVQK
VREAERAKVV AAYRGRIKEM VMGVVKRMDR GNIILDLGDN AEGIVPQEEM IPREAVRPGD
RLRGYLKEVR AEGRGPQLVI SRTAPELLIE LFKLEVPEIN ENRIEVKGAA RDPGLRAKIA
VKTNETRIDP VGACVGMRGS RVQAVSNELA GERVDIVLWD EDPARFVINA MAPAEVASIV
VDEERHSMDV AVAEGNLSQA IGRGGQNIRL ASQLTGWELN VMTEQEAEEK GESEAKSLQQ
MFMEQLDVDE EVAAILVHEG FSSIEEMAYV PEQEILAIEE FDSQIVQELR NRARDVLLTR
AIANEETIET VQLDQELLDM EEIDHGLASA LASKGIVTKE NLAEQAVDEL MEIEGMNREK
AARLIMAARE SWFVSEKQDE ETEERQ
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