| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2040 |
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| Symbol | |
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| ID | 3705191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2350337 |
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| End bp | 2351512 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738515 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_344030 |
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| Protein GI | 77165505 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.527359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCA CTAACGAACA CGGAGAAGCG AGAACGGAGT GCACCATCTC CCGCCGTTTT
CCGCGCAATC AAATGAATAA GCCTAAGGTG GTTGTGGGTC TATCCGGAGG GGTTGACTCC
TCGGTTGCTG CCCTCCGGCT TCAGCAGCAA GGTTATCCCA CAAGTGGCCT TTTCATGAAG
AATTGGGTGG ATTTTGCCGA CGAATCCGAA TGCACTGTTG CGCAAGATAG GGAAGACGCC
CAAGCGGTGA CCTCCCTGCT AGGGATCTCC TTTCATGAAG CCAATTTCGC AATGGAATAC
TGGGATCGCG TATTCCACTA CTTTCTGGAA GAATACCGCC TGGGCCGTAC TCCCAATCCG
GATATTCTGT GTAACCGGGA AATTAAGTTC AAAACCTTCC TTGACCACGC TCTAGCGCTC
GGCAATACTC TTATCGCTAC GGGTCATTAT GCCCGCATTG ACCAGAAAGA AGGACGTTAT
CGTCTCCTTA AAGGACGGGA TAAAAATAAG GATCAAAGTT ATTTTTTGTA TACTTTAGGG
CAAAAACAAC TTTCTCATAC GCTGTTTCCG TTGGGAGAGT TGGAAAAGCC ACAAGTCCGC
CGAATTGCTA TACAAGCCCG GCTTCCTAAC CACAGCAAAA AAGATAGCAC CGGAATCTGT
TTTATCGGAG AACGCCGTTT CAAGGAATTT CTCAGTCGCT ATCTCCCCGC TCAGCCAGGT
GAAATGCGCA CCCCCGATAA GGAATGGATC GGCCAGCACG ACGGGCTTAT GTACTACACT
TTAGGACAAC GGCGGGGACT AGGCATTGGC GGCCGTAAAA ATAGCAACGG CGCGCCCTGG
TTCGTGGTGG GTAAAAACTT GCCACAGAAC ACCCTCTATG TGGCCCAGGG CAGGCATCAT
CCTTGGCTGA AAAGCTTAAT TCTGGAGGCT AATCAGCTCC ATTGGGTAGC TGGCCACCCC
CCACCCCTGC CCTATTCCTG TACCGCCAAA ATCCGCTACC GCCAGACCGA TCAGCACTGC
ACCCTTACAG CAATAGCCAA TGGCTATATC AAAGTCATTT TTAATGCACC ACAATATGCC
GCCACTCCAG GACAAGCCAT CGTCTTCTAT CAGGACGATG AGTGCCTTGG TGGAGGCACC
ATTACTACCA CGGACGCACT GGGGATACAA TCATGA
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| Protein sequence | MHSTNEHGEA RTECTISRRF PRNQMNKPKV VVGLSGGVDS SVAALRLQQQ GYPTSGLFMK
NWVDFADESE CTVAQDREDA QAVTSLLGIS FHEANFAMEY WDRVFHYFLE EYRLGRTPNP
DILCNREIKF KTFLDHALAL GNTLIATGHY ARIDQKEGRY RLLKGRDKNK DQSYFLYTLG
QKQLSHTLFP LGELEKPQVR RIAIQARLPN HSKKDSTGIC FIGERRFKEF LSRYLPAQPG
EMRTPDKEWI GQHDGLMYYT LGQRRGLGIG GRKNSNGAPW FVVGKNLPQN TLYVAQGRHH
PWLKSLILEA NQLHWVAGHP PPLPYSCTAK IRYRQTDQHC TLTAIANGYI KVIFNAPQYA
ATPGQAIVFY QDDECLGGGT ITTTDALGIQ S
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