| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2027 |
|---|
| Symbol | |
|---|
| ID | 3705178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2338734 |
|---|
| End bp | 2339987 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637738503 |
|---|
| Product | glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_344018 |
|---|
| Protein GI | 77165493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGCA AAGAGATGCG TATTGCCAGT TATGATGAGG AACTCGAGAC CGCTCTTACC
AATGAAGCAC GGCGGCAAGA GGAACATATT GAATTAATTG CTTCGGAGAA TTATGTCAGT
CCTCGGGTTT TAGAAGCCCA AGGGTCCGTG CTCACTAACA AGTACGCCGA AGGCTATCCT
GGCAAGCGTT ATTATGGGGG CTGTGAGTAC GTGGATGTGG CGGAGCGGTT AGCTATCGAA
CGGGCTAAAA TATTGTTCGA GGCTGATTAT GCTAATGTCC AACCCCACTC TGGCTCTCAG
GCGAATGCCG CTGCCTGTCT AGCTTTGCTA GCGCCGGGCG ATACCCTCAT GGGGTTGAGT
CTTGCCCATG GCGGGCATCT CACCCATGGC GCCAAGGTCA ATTTTTCAGG TCAAATTTTT
AACGCAGTTC AGTTTGGGGT AAATGCAGAT ACGGGACTTA TTGACTATGA TGAGGTGGAG
CAGCTAGCAA AGGCACATCG CCCCAAACTG ATTATCGCCG GATTTACCGC TTATTCCCGT
ATAGTTGATT GGCAGCGTTT CCGAGCGATC GCGGATGGAG TAGGCGCCTA TTTGCTAGCG
GATATCGCCC ATCTGGCCGG GATGATCGCC GCAGGAATTT ATCCTAATCC AGTGCAAATC
GCCGATGTCA CGACTAGCAC AACCCATAAA ACTTTACGGG GTCCCCGTTC AGGACTGATT
TTGGCTAAAG CCAACCCTGA GATTGAGAAA AAACTCAATT CCAAGGTCTT TCCCGGTATT
CAAGGGGGGC CTTTAATGCA TGTTGTCGCG GCCAAGGCGG TAGCCTTTAA AGAGGCTATG
GAGCCGGCGT TTAAGGATTA TCAACGGCAA GTGATTCGCA ATGCCCAGGC GATGGCAGAG
GCTATTCAGT CTCGAGGCTA TAAAATTGTT TCCGGTGGGA CCGATAGTCA TCTGTTTTTA
GTGGATCTCG TTGCCAAGGG TTTGACCGGC AAGGCTGCAG ATGCCGCGTT GGGTCGAGCA
AATATCACCG TAAATAAAAA TACGGTGCCT AATGATCCTC AATCTCCGTT TGTAACCAGT
GGTATTCGCA TTGGTAGCCC CGCCATGACT ACGCGTGGTT TTAAGGAAGC GGAGATTTGC
GAATTAGCGG GATGGGTTTG TGATGTGCTG GACGATATTG AAAATGAGAC TGTAATTGCG
GACACTAAGG AGAAAGTATT GGCTCTCTGC GCCCGCTTCC CGGTCTATGG TTAG
|
|---|
| Protein sequence | MYSKEMRIAS YDEELETALT NEARRQEEHI ELIASENYVS PRVLEAQGSV LTNKYAEGYP
GKRYYGGCEY VDVAERLAIE RAKILFEADY ANVQPHSGSQ ANAAACLALL APGDTLMGLS
LAHGGHLTHG AKVNFSGQIF NAVQFGVNAD TGLIDYDEVE QLAKAHRPKL IIAGFTAYSR
IVDWQRFRAI ADGVGAYLLA DIAHLAGMIA AGIYPNPVQI ADVTTSTTHK TLRGPRSGLI
LAKANPEIEK KLNSKVFPGI QGGPLMHVVA AKAVAFKEAM EPAFKDYQRQ VIRNAQAMAE
AIQSRGYKIV SGGTDSHLFL VDLVAKGLTG KAADAALGRA NITVNKNTVP NDPQSPFVTS
GIRIGSPAMT TRGFKEAEIC ELAGWVCDVL DDIENETVIA DTKEKVLALC ARFPVYG
|
|---|
| |