| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2019 |
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| Symbol | prfC |
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| ID | 3705209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2329572 |
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| End bp | 2331200 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738495 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_344010 |
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| Protein GI | 77165485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCCA CTGAACTTAT CCGAGAAATA GAGAAAAGAA GAACCTTCGC TATCATTTCC
CACCCGGATG CAGGGAAAAC GACTCTCACG GAGAAATTAC TGCTTTTCGG TGGGGCGATC
CAGTTAGCGG GTACCGTAAA ATCCCGCAAG GCGTCGCGCC ATGCCACTTC GGACTGGATG
GAATTGGAAA AGCAGCGGGG AATTTCGGTC ACTTCCTCGG TGATGCAGTT CCCTTATAAA
GATCGTATTA TCAATTTATT GGATACGCCT GGCCATGCTG ATTTTTCCGA GGATACTTAT
CGGACTCTGA CTGCTGTGGA TTCGGCTTTG ATGGTCATTG ATAGCGCCAA GGGCGTTGAA
GAGCGAACCA TCAAATTGAT GGAAGTTTGT CGCCTGCGCA ATACGCCTAT TCTGACTTTT
ATCAATAAGC TGGATCGAGA AGGCCAAGAA CCTATCGAAC TCCTAGACGA AATTGAGCGG
GTACTGGGGA TTCGCTGCGC GCCCTTGACT TGGCCCATTG GGATGGGAAA ACGCTTTAAA
GGAATTTTCC ATCTAAGCCA TAACCGCATC CATTTATTCA GCCCTACCCA TGGCGGCAAG
ATCAAAACTG GGGAGCAGAT TCAAGGATTG GATAATCCCC GTCTCAGTGA ACTGCTAGGC
AACCAGGTGG AAGAATTGCA AGAAGAAATC GCTCTGGTGC AGGGTGCCAG TCATCCCTTT
GATAAGGAAG CTTTTCTGGC TGGAGAGCAG ACGCCCGTGT TTTTCGGATC AGCCATGAAT
AATTTTGGCG TGGAAGAACT GCTAGATGCT TATGTGGAGT ATGCGCCTTC CCCTCGGGCC
CGTGAGACGG CGACTCGCAG GGTAGCCCCC AAGGAGCTAA AATTTAGCGG CTTTGTATTC
AAGATCCAGG CCAATATGGA TCCCCAGCAT CGGGATCGGA TCGCCTTTTT GCGAGTGTGC
TCCGGCAGCT ACCAGAAAGG GATGAAGTTG CGACATACTC GCTTGGGACG GGAGGTACAA
ATCGCCAATG TCCTAACCTT CATGGCCGGG GAACGGGAGC AAGCTGAAAC TGCTTGGCCT
GGTGACATTA TTGGCTTTCA CAACCATGGC ACTATCCAAA TTGGTGATAC TTTCACCCAA
GGCGAGGAGC TGCAATTTAC TGGAATTCCC CATTTTGCGC CGGAGCTTTT TCGCCGGGTT
CGCCTCAAAG ATCCGCTCCG TACGAAAGCC TTGCTTAAAG GGTTACAACA GCTAAGCGAG
GAAGGAGCAA CCCAGCTCTT TCGCCCTTTG CTGGGTAACG ACTTGATTTT GGGGGCAGTA
GGGGTGCTCC AGTTCGATGT GGTCGCCCAT CGCCTAAAAC ATGAATATAG CGTAGATTGT
GGTTATGATA GTGTGCAAGT GGTCACTGCC CGTTGGGTGA GCTGTAACGA CTCTCGGCGG
TTGGAGGAAT TTCGCACCAA AGCGGCTGCT CATTTAGCTT TGGATGGAGC GGGCAATCTT
ACTTATTTAG CGCCCACTCG GGTTAACCTG GATCTCACCA TGGAACGTTG GCCCGAAGTG
GCTTTCCATG CTATTAGGGA GCACGCTTTG GGGGTAGAAG ACGGAAATCC ATTAGTGGCG
AGCCTATAA
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| Protein sequence | MSPTELIREI EKRRTFAIIS HPDAGKTTLT EKLLLFGGAI QLAGTVKSRK ASRHATSDWM
ELEKQRGISV TSSVMQFPYK DRIINLLDTP GHADFSEDTY RTLTAVDSAL MVIDSAKGVE
ERTIKLMEVC RLRNTPILTF INKLDREGQE PIELLDEIER VLGIRCAPLT WPIGMGKRFK
GIFHLSHNRI HLFSPTHGGK IKTGEQIQGL DNPRLSELLG NQVEELQEEI ALVQGASHPF
DKEAFLAGEQ TPVFFGSAMN NFGVEELLDA YVEYAPSPRA RETATRRVAP KELKFSGFVF
KIQANMDPQH RDRIAFLRVC SGSYQKGMKL RHTRLGREVQ IANVLTFMAG EREQAETAWP
GDIIGFHNHG TIQIGDTFTQ GEELQFTGIP HFAPELFRRV RLKDPLRTKA LLKGLQQLSE
EGATQLFRPL LGNDLILGAV GVLQFDVVAH RLKHEYSVDC GYDSVQVVTA RWVSCNDSRR
LEEFRTKAAA HLALDGAGNL TYLAPTRVNL DLTMERWPEV AFHAIREHAL GVEDGNPLVA
SL
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