| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2002 |
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| Symbol | |
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| ID | 3705192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2308232 |
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| End bp | 2310238 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738479 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_343994 |
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| Protein GI | 77165469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0486961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAAATC TTAACCCCCA ACAGCGTTTG GCAGTCCGCC ACATCGATGG CCCCCTGTTG
GTGTTGGCGG GAGCTGGCAG CGGTAAAACC CGAGTGATTA CCCACAAAAT TGTCTATCTC
ATTGAGCAAT GTCATTTGTC GGCGCGATCC ATTGTGGCGG TGACGTTCAC CAATAAAGCC
GCCCGGGAAA TGAAGTCTCG GATAGGACAA TTACTAACTA AGGGAGAAAG CCGGGGATTA
GTTGTTTCTA CCTTTCACGC TTTGGGACTC AATATCTTGC GCCGCGAACA CGAAATTCTC
AGACTGAAAG CGGGTTTTTC TTTGCTGGAT GCCCAGGATA GCCGCGCACT TATCTGCGAT
CTCCATCAGC AAGAGTTTAG TAGCGGCGGA GAGGAAAGCA GCTTCCAGTG GCAAATTTCC
ACCTGGAAAA ACGCATTAGT GACGCCTGAG GAAGCCTTAT GCAGGGCCAG CAATGATCAG
GAAGCCATAG CAGCCCAGCT TTATGCCGCT TATGATCGGC GCCTGCGGGC TTATAATGCT
GTCGATTTCG ATGATTTGAT TGGTTTACCT GTTCATCTTT TAACGACGCG CCCGGAAATT
CTCAGTCGTT GGCAAAATTA TTTCCGTTAT CTGCTAGTAG ACGAGTATCA AGATACCAAC
GCAGCCCAGT ACCAGTTGGT TAAGTACTTA GCTGGAGTGC GGGGTGCCGT TACCGTGGTG
GGAGATGATG ACCAATCGGT ATACGCTTGG CGGGGCGCCC AGCCGGAAAA CTTGCATCAG
CTCAAAGAAG ATTTTCCCCA GCTTACGGTT ATTAAGCTAG AGCAGAACTA CCGCTCCACC
ACTCGCATTT TGCGGGTAGC CAATCAACTG ATTAGCTCTA ATCCCCATGT CTTTGAAAAA
CGACTTTGGA GTGCCTTAGG CGAAGGTGAT TCCATTCGGG TGTTGACCTG CCGGGATGAG
CACCATGAGG CAGATAGAGT CGTTGCCGAA CTGATGTACC ATCGTTTTAA GTACCGCACG
GCATGCCGTG ATTACGCCAT CCTATACCGG GGCAACTATC AATCTAGGCC CTTTGAGCGG
GCTTTGCGGG CCCACGGCAT CCCTTATGTT CTGAGTGGAG GGACTTCCTT CTTCGAGCGA
GGCGAAGTCA AGGATATCAT GGCTTACCTG CGCCTGTTGG CTAATGAGGA TGACGATAAT
GCTTTTTTAC GGGTGGCTAA TACGCCGCGC CGGGGAATCG GAGCGGTCAC CCTGGAAAAA
CTGGCGGGAT ACGCGGCTTT GCGGGGGCAG AGCTTGTTAG TCTCAGGCTT TGAATTAGGC
TTAGGAGAGC ATCTTTCCGG TGAAGCCTTG CCTAGGCTGC GCCGATTTTG CGAGTGGGTT
GTGGATTTGG CTGATCGGGG CCGCCGTGGC GATCCCATTG CGGTGATAAA AGACCTCATT
GCTGACATTG ATTATCGTGC CTGGCTTGAT GAAAATTGTA ATGATCGGCG TACCGCAGAG
CGGCGGATGG CTAATGTGGA GGAGCTGGTA GGGTGGCTGG AACGCCTCTA TCAGCGGGGA
GATGAACGCC GGGCCCTCGG CGATTTGGTA GCGGAAATAA GCTTGCAAGA TATCCTGGAG
CGAACCCAGG AGAAAAAGGA CCGGGATGCG GTTAACTTAT TGACGCTCCA CGCCGCCAAG
GGCCTAGAAT TTCCCTACGT TTTTATGGTG GGGATGGAGG AGGAATTGCT ACCTCACCGA
ACCAGCGTGG AGCAGGGCAC TTTAGAGGAG GAACGGCGCT TGGCTTATGT GGGAATCACC
CGGGCCCAAA GGAGTCTTTG TTTTACTATG GCGGAAAAGC GTCAGCAGTA TGGGGAAACC
ATCTTGTGCG AACCCAGTCG GTTTTTGTCA GAACTACCGG CTGCGGATCT TCAATGGGAG
CGGGAGGGAA TTCCCCGTGA CCCCGCAGAA CGGATGGAGA GGGGTCAAGT GCATCTGGCT
AATTTGCGGG AGATGCTCCG TCAGTAG
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| Protein sequence | MPNLNPQQRL AVRHIDGPLL VLAGAGSGKT RVITHKIVYL IEQCHLSARS IVAVTFTNKA
AREMKSRIGQ LLTKGESRGL VVSTFHALGL NILRREHEIL RLKAGFSLLD AQDSRALICD
LHQQEFSSGG EESSFQWQIS TWKNALVTPE EALCRASNDQ EAIAAQLYAA YDRRLRAYNA
VDFDDLIGLP VHLLTTRPEI LSRWQNYFRY LLVDEYQDTN AAQYQLVKYL AGVRGAVTVV
GDDDQSVYAW RGAQPENLHQ LKEDFPQLTV IKLEQNYRST TRILRVANQL ISSNPHVFEK
RLWSALGEGD SIRVLTCRDE HHEADRVVAE LMYHRFKYRT ACRDYAILYR GNYQSRPFER
ALRAHGIPYV LSGGTSFFER GEVKDIMAYL RLLANEDDDN AFLRVANTPR RGIGAVTLEK
LAGYAALRGQ SLLVSGFELG LGEHLSGEAL PRLRRFCEWV VDLADRGRRG DPIAVIKDLI
ADIDYRAWLD ENCNDRRTAE RRMANVEELV GWLERLYQRG DERRALGDLV AEISLQDILE
RTQEKKDRDA VNLLTLHAAK GLEFPYVFMV GMEEELLPHR TSVEQGTLEE ERRLAYVGIT
RAQRSLCFTM AEKRQQYGET ILCEPSRFLS ELPAADLQWE REGIPRDPAE RMERGQVHLA
NLREMLRQ
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