Gene Noc_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1990 
Symbol 
ID3704874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2288077 
End bp2289069 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content52% 
IMG OID637738466 
Producthypothetical protein 
Protein accessionYP_343982 
Protein GI77165457 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000122481 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CAACATTCAC AACCACAGTC GCTCTCGGCA TCTTGCTGGG AACCACCAAC 
GCCCACGCGT TGCTTATCGA TCCCGACGGC GGAGGAGGTG CTTTTAACGC TATCGATGTG
CATGCCCTTG ATTGGAACGC GGGCAGCGCC CTAGCGGTTC CAGATGAAGG GGGTTCTTTC
AAACCGGACC AAATCGCTGT AGGCGATACC TTTACCCAGT ATGCCCATGC CGAATTAAGC
GTTTTTAACG ATGCTAGCGG CAATGCCAAT GGAACCTTTA TCGGCTCCGG CGAGCAATGG
ACCTTTGTGC TCGGCTTTAG GGAAGAAGTC GTAAGCGTGG ATCCCACCGC CCGTTCCGCC
AGTTTTAGTG CGATTGGAGG AGGCACCAAC TTCTTCGAAA TCTGGTATGG GGACGATGAC
AATGACAATC TGGAGGGAAC AGGTTTTAAT AATGGCACCA AGATCCTGTC TGGTACAGTA
AGCAGCGGGA CAAGCAACTT TGACAATGAC GAAACCCTGG CGCCCTTCAC CGGCGACCCT
GGGGATGCCC AACCCTTAGA TAATTTCGGC AATGATGATC GCCCAGGGAT ACGCAGCGTC
ACTGGTAGTG GAGGCGCCAC AATTAACATT AGCGTTAGCA GCTTTGACTC GGCTTTCTTC
ACTGGCGCGA TCAGCAGCTT AGAACTTAAG ATGATAAATT TTGATACCAG CCTAATCGAC
CCTTTCAATA ACACCAACCC AGCCGACTGT TTCACCGGTG CAGCGGGTGG GGGCACGGTT
AACGCTGCTT GCAATGGCCC CAATAATATC AGTTTCGGAA TGAGTTCTGG CGATATTAAC
GGCTTCAACA CCACTAATTT TGAGTTCCAG CAAGATGCTA TCTCTAACCT TAAAGTCACC
ACTACTACTG TTCCCGAGCC TTCTTCGATA TTTCTGCTTG GCACGGGTTT AGCCGCCCTG
GGCTTTGCCG GCACCCGCAA GCGCCGCCGC TAA
 
Protein sequence
MKKTTFTTTV ALGILLGTTN AHALLIDPDG GGGAFNAIDV HALDWNAGSA LAVPDEGGSF 
KPDQIAVGDT FTQYAHAELS VFNDASGNAN GTFIGSGEQW TFVLGFREEV VSVDPTARSA
SFSAIGGGTN FFEIWYGDDD NDNLEGTGFN NGTKILSGTV SSGTSNFDND ETLAPFTGDP
GDAQPLDNFG NDDRPGIRSV TGSGGATINI SVSSFDSAFF TGAISSLELK MINFDTSLID
PFNNTNPADC FTGAAGGGTV NAACNGPNNI SFGMSSGDIN GFNTTNFEFQ QDAISNLKVT
TTTVPEPSSI FLLGTGLAAL GFAGTRKRRR