Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1942 |
Symbol | |
ID | 3705479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2222474 |
End bp | 2223949 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637738418 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_343934 |
Protein GI | 77165409 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGAAA GCAAGACTGA GCCTGGTGTT CGGCACTCGA TAGTGGTTAC AACGTTGAAC CGCTATGCAG TTTTAGTGAT TTCCTTGGTC TCCACGATGG TGTTGGCGCG CTTGCTTACG CCGGCCGAGA TCGGCATTTT TTCCATGGCG GTGGTCTTCG TGAACCTTGC CCATTCCATG CGTGACTTTG GCGTAGGCCG GTACATCGTT CAGGAGAAGG AGCTTACCGT AGATCGTATC CGGTCCGCCT TCGGAATCAC GTTGGGTATC GCCTGGTCTA TGGCCATTGT GCTAGCAATT GCAGCGCCTT GGGTTGCTGA TTTTTATGGG GATGAAAGGG TGACAGGAAT CCTGCGGGTG CTTGCCGTTA ATTTCGTTTT AATTCCGTTT GGCTCCGTGG TTCTCTCTTA CTTGAACAGG GAAATGCAGT TTACCACTAT TTTCCTGGTG GGCGTCATTA GTGAATTTGT CCGGGCTGCG AGCGGTATTT GGTTTGCATG GATAGGACTT GGCGCTATGA GTTTAGCATG GAGCGCACTT CTTGGGGTAA TTGCCACAGT AGTATTGGCG CGTATTCTAG GGCCTAGCCA CTTCATCCTG CGCCCAGCAT TTTGTGAATG GCGGAGGGTT ATGAGCTTTG GCGGACGGGC CACGCTTGCA ACCATTGCAT TCCAGTTTCA GCGGGGAGCG CCTGAGGTAG TCATTGGCCG GTATTTGAGT GCTGCAGCGG TAGGTTTCTT CAGCAAAGCT CTTGGGGTTA TTCGGCTCTT CGACCGCACG GTGCTATCGG CGGTAAGCCC GGCAATTTTG CCCCACATGG CGGCCAAGCA CCGCTCGGGA GAGAGTGTCG CGGGTTTTTA TGCCCATGGG CTTGGGTTAA TTACCGCCCT CGCGTGGCCA TGCTATGCTT TTATCGCCAT CATGGCGTTC CCGGTGGTAC GAATTCTGTT CGGCGATCAG TGGGATGCTG CGGTTCCCCT GGCGCGCATT CTGGCCATCT ATGCGGCGGT CGATGCTTTG TATGCGTTTA CCGCGCAGGC GCTGATTGCG GTCGGTGCGG TACACCTGCT GGTGCGGCTA AGGGTGGCTA CCCTTTTAGC GACGGTTTTG GCGCTGGTGC TGGCTGTTTC TTATGGGTTA GAAGTTGTTG CTTTTGCGAT GGTTTTTCCG GCTGTAGTGG GGCTGATCTA TTCCTCTTTG CTGATGCGTT CAGCTATTGG TCTCAAGGGT AGGGTTTACC TAAAGGCCAC TGCCGCAAGC TTATTGATTA CCGCTGCCAC AGTAGCGTTC CCCTTGTTCT ATCTGGGGAT GCCGGCGGCA GTTGGGCAGC CCCATTGGCA ATTTTTTATT ATTAGTGCTG CCGGCGGCAG TGCAGGCTGG ATGGTGGCTG TAATTACGCT TCGTCATCCT ATTTGGGACG AGTTGAGACT TCTATTTTCC CAGGCTCGGA ATCGGTTATG GCCGGTTAGC AGTTAG
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Protein sequence | MLESKTEPGV RHSIVVTTLN RYAVLVISLV STMVLARLLT PAEIGIFSMA VVFVNLAHSM RDFGVGRYIV QEKELTVDRI RSAFGITLGI AWSMAIVLAI AAPWVADFYG DERVTGILRV LAVNFVLIPF GSVVLSYLNR EMQFTTIFLV GVISEFVRAA SGIWFAWIGL GAMSLAWSAL LGVIATVVLA RILGPSHFIL RPAFCEWRRV MSFGGRATLA TIAFQFQRGA PEVVIGRYLS AAAVGFFSKA LGVIRLFDRT VLSAVSPAIL PHMAAKHRSG ESVAGFYAHG LGLITALAWP CYAFIAIMAF PVVRILFGDQ WDAAVPLARI LAIYAAVDAL YAFTAQALIA VGAVHLLVRL RVATLLATVL ALVLAVSYGL EVVAFAMVFP AVVGLIYSSL LMRSAIGLKG RVYLKATAAS LLITAATVAF PLFYLGMPAA VGQPHWQFFI ISAAGGSAGW MVAVITLRHP IWDELRLLFS QARNRLWPVS S
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