Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1925 |
Symbol | |
ID | 3705557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2202059 |
End bp | 2203987 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637738401 |
Product | TonB-dependent receptor |
Protein accession | YP_343917 |
Protein GI | 77165392 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.55144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATAT TTTCAGCGTT TGGATTAGTT GGTTGGGTCG TTTTTGGGTC TTTTGTCTAT GCCGGTGAGC AGCAGACCCC AAAAACCCTA GAGCCGATAG TAGTGACGGC AACACGGACT CCAACGCCAG TGCAAGATGT AGGGAGTGAT ATGAGTGTCA TTACCGCCGA GGATCTTGTT CAGCGGCAAA GAATGCCAGT ATTAGAGGTA TTGCGGGGGC TGCCCGGGGT CGATGTGGTT CAAAGCGGCG GTTTAGGACA GCAGACCTCG GTATTCCTGC GGGGGGCAAA CGCTAACCAT ACCCTGGTAC TCATTGATGG GGTAGAAGCC AATGATCCCA GCAACCCCAG TGGTTCTTTC GATTTCGCCA ATTTGCTGAC GGATAATATC GAGCGCATTG AGATTCTGCG AGGGCCGCAA AGCACCCTTT ACGGTTCCGA TGTCATTGGT GGCGTTATTA ATATTATTAC TAAGAAGGGA AGGGGCAAGC CTCGCGTTAC CGCTCGCGTC GAAGGTGGCT CTTTTAGTAC CTTCAAGGCG ACAGGCGGAG TACATGGCGG AAATGACCTT GTTAATTACA GCCTGACCGG GACTCGCCTT GAAAGCGCTG GCATCTCAGC GGCTGATTCT CGCCGGGGCA ACCCGGAAAA AGATGGTGAT CGGAATACAA CCCTCGCGGG GCGATTCGGG CTAACGCCTA CGCCCATTTT TTCCCTTGAT ACTACCTTGC GCTATAACGG TAACCATACT GACATTGATG GCTACAGAGG TGTCGTGCCC ATAGACGATC CTAATTCGAC TCTGGATAGC CAACAGTTGT TTCTCCGGGG TCAAGGACAT CTTACTTTGT TTGATAATCT ATGGGAACAA ATACTTGGGG TTTCTTTTAC CCACCATGAT AGGGAAAATC AAAATCGGCC CGATCCTCAG AACCCTTTTC CTTTCCCAGG TTCTTTTAAG GGGGAGAAAA TCCAAGTGGA TTGGCAAAAT AATTTGCAGT TCTCTAAGAA GCATACCCTA ACCTTTGGAT TCGCCTGGGA AGAGGCCAGC ATGGAGGCCC AATCGCCGGG TTCAAACTTG CCCCGGCAGA GCGTTGACAC CGAGGGATAC TACTTGCAAG CTCAATTGAG CTTTTGGGAT AAGCTGTTTC TCACTGGCGG GGTGCGCTTG ACTCATCATA GTATTTTTGG CTCCAAAATC ACTGAACGGG TAACCGCCGC CCTGGTGCTT GACACGCTGG GGCTCACGCT CAGAAGCAGC TATGGCACTG GGTTTAAAGC CCCTACTTTA TCTCAGTTAT TCGATGATCG CTTTAATGCC CCTCAGGATA ACCGCTTCAA TACTCCTCAG CTTAAATTCA ACAATCGGGA TTTAAAGCCT GAAAAGAGCA GCTCCTGGGA TATTGGGGTA GAGCAATCAT TTTGGGACGA GCAAGGGGCG GTTGGGGTGA CCTACTTTGA CAATGAATTG ACCGATTTAA TTCAGTTTAG CCAGGTAGCT GCTGATAAGT TCCAGCTTAT TAATATCGAT GCGGCCAAAA TTAAAGGCTG GGAAGTCTTT ATGAATTTAA CGCCCCTTAA GGGGCTGACT TTGCGGGGAA ATTATACCCA GATGCATACT CAAGATGAGA AAACCGGTCA GCCCTTGGTG CGGCGTCCGG AACACAAAGC AGGCTTTAAC GCTAATTACC GCTTTTTGAG TAAGGGTAAC CTCCATCTTC AGGTGGTTTA TGTGGGGCAT CGGCAAGATG TAGGGGGTAT CCCTCTGCCT AGCTATACAG TAGTTAACGC TGCTATTTCC TATGAGGTCA CTAACTATTT TCAATTATTT GCCCGGGCGA ATAATCTGCT GGATAAACAA TATCAGGAAG TGTTTGGATT CGGCACACCA GGCATCTCCG GCTTTGGTGG TATCGAGTTT TCTTTTTGA
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Protein sequence | MKIFSAFGLV GWVVFGSFVY AGEQQTPKTL EPIVVTATRT PTPVQDVGSD MSVITAEDLV QRQRMPVLEV LRGLPGVDVV QSGGLGQQTS VFLRGANANH TLVLIDGVEA NDPSNPSGSF DFANLLTDNI ERIEILRGPQ STLYGSDVIG GVINIITKKG RGKPRVTARV EGGSFSTFKA TGGVHGGNDL VNYSLTGTRL ESAGISAADS RRGNPEKDGD RNTTLAGRFG LTPTPIFSLD TTLRYNGNHT DIDGYRGVVP IDDPNSTLDS QQLFLRGQGH LTLFDNLWEQ ILGVSFTHHD RENQNRPDPQ NPFPFPGSFK GEKIQVDWQN NLQFSKKHTL TFGFAWEEAS MEAQSPGSNL PRQSVDTEGY YLQAQLSFWD KLFLTGGVRL THHSIFGSKI TERVTAALVL DTLGLTLRSS YGTGFKAPTL SQLFDDRFNA PQDNRFNTPQ LKFNNRDLKP EKSSSWDIGV EQSFWDEQGA VGVTYFDNEL TDLIQFSQVA ADKFQLINID AAKIKGWEVF MNLTPLKGLT LRGNYTQMHT QDEKTGQPLV RRPEHKAGFN ANYRFLSKGN LHLQVVYVGH RQDVGGIPLP SYTVVNAAIS YEVTNYFQLF ARANNLLDKQ YQEVFGFGTP GISGFGGIEF SF
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