Gene Noc_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1894 
Symbol 
ID3705487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2162631 
End bp2163068 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content37% 
IMG OID637738373 
Producthypothetical protein 
Protein accessionYP_343890 
Protein GI77165365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAA ATAAATCTTA CGCAACAGAT TTTAATCTAT GGGTTCAACA AACAGCTAGG 
CTTTTGCGTG AACATCGCTG GCAAGATATT GATTTGGAGA ATTTAGTTGA GGAGATTGAA
GACTTGGGTA AGAGTGAAAG AAGAGGTATT ATAAGTCAAT TAACTCGCCT CTTACTTCAT
CTACTCAAGT GGCAATATCA ACCTCAACGA CGCTCAGATA GCTGGCTTGA CTCTATCACT
GATGCCAGGC TCCAAATTGA ACTAACGGTT AAAGATAGTC CTAGTTTAAA AGATTATCCG
TTAGAACAGC TTAATCGGAG TTATAAAAAC GCACGCCATA GTGCATCCAA ACAAACAGTA
CTTCCTGTTT CAGCATTTCC TGAAGAATGT CCATATTTAT TAGAAAATAT TCTTAATGAA
GATTGGTTGC CAGAGTAA
 
Protein sequence
MSVNKSYATD FNLWVQQTAR LLREHRWQDI DLENLVEEIE DLGKSERRGI ISQLTRLLLH 
LLKWQYQPQR RSDSWLDSIT DARLQIELTV KDSPSLKDYP LEQLNRSYKN ARHSASKQTV
LPVSAFPEEC PYLLENILNE DWLPE