| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1819 |
|---|
| Symbol | |
|---|
| ID | 3705259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2062013 |
|---|
| End bp | 2063125 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637738302 |
|---|
| Product | PepSY-associated TM helix |
|---|
| Protein accession | YP_343819 |
|---|
| Protein GI | 77165294 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0029007 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGTT TGCTGCAGAA AACGCATCTC TGGATCGGGT TGATGGCGGG AGCATTATTT
TGTATCTCCG GACTCTCCGG CAGCGTGCTG GTATTCGATG ATGAACTCGA TGCTTATTTT
AATTCGGAAC TTTGGCAAGT CGAACCCCAA CCTGGCCCCA TTCGGCTCAA TGAAGCAACC
ACTAAGATTC GGTCTGCGTT TCCAAGTTCT GTTTTGCTCT ATGCGCGTTT GCCCCGCGAG
CCCAATCACA GCATCGAATA CTGGGTAAAG GACGAGGCGC TGCAGCGGGT TTATATTGAT
CCTTGGCGTT TGGATATTCT CGGCGTTCGA GGAGAGCATG CCGGGCTGCT GGGATTTCTA
CATGATCTGC ATGTGCATTT ATTAGCAGGA GCACAAGGTC TACTCGCTAA TGGCATACTA
GGCCTGATCC TGCTGTTGAT GGTTGTAACC GGGCTGTGGC TTGCCTGGCC TGGCTGGCGG
CGGTTATTAA AAACCTTGCG TCTGCCTCGT ACGGAAGCGC GGGTAGCCCG TTGGTTTGCG
CTCCATCGTT CGGTGGGTCT AATTTCGTTA TTGCTGCTGT TTAGCAGCGC TCTAACGGGA
GCGGCCATGG TTTTTCATGA ACAAGCCAAT GCCGCACTAA TTGCCCTGTT TGGCGGTCCG
AGTCTACCGG AGCCGCCGCC CATTAAAGCT TCCCCCTTGC AGTCCGTATC GAAATCGCCA
GCCGAGTTAC TCAACATAGC GGAATCGGCT GTGGGGGATG AAAGGGCTAC CTGGCTCCAG
TTTCCGGCTC AGCCCTCGGT GCCTTTTATC GTCAGGCTAA GGCATCCAGA TAATCCCCAT
CCGAACGGTA CCAGCTATGT GGCCTTGGAT GCCACTACTG GCGAAATACT CATGGCCCAC
GATGAGACAC GCAGCGGTCC TGGCCAGCAG ATAGCAGATC TCAAGTATCC TCTGCATATC
GGGACTGCTC TGGGCTTGCC CGGCCGTTTA GTCATTCTGG TGGCAGGTAT GATGCCGACA
TTGCTGTTTG TCACCGGGGT CTATACCTGG TGGCGGAAGA GGCAGAAGCG CCGGGCCCGG
TTAGGAAAAT CACCCTCGCC ATCGAACGCT TGA
|
|---|
| Protein sequence | MYRLLQKTHL WIGLMAGALF CISGLSGSVL VFDDELDAYF NSELWQVEPQ PGPIRLNEAT
TKIRSAFPSS VLLYARLPRE PNHSIEYWVK DEALQRVYID PWRLDILGVR GEHAGLLGFL
HDLHVHLLAG AQGLLANGIL GLILLLMVVT GLWLAWPGWR RLLKTLRLPR TEARVARWFA
LHRSVGLISL LLLFSSALTG AAMVFHEQAN AALIALFGGP SLPEPPPIKA SPLQSVSKSP
AELLNIAESA VGDERATWLQ FPAQPSVPFI VRLRHPDNPH PNGTSYVALD ATTGEILMAH
DETRSGPGQQ IADLKYPLHI GTALGLPGRL VILVAGMMPT LLFVTGVYTW WRKRQKRRAR
LGKSPSPSNA
|
|---|
| |