Gene Noc_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1816 
Symbol 
ID3705256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2057810 
End bp2058631 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID637738299 
Producthemolysin-type calcium-binding region 
Protein accessionYP_343816 
Protein GI77165291 
COG category 
COG ID 
TIGRFAM ID 



Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000360233 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT TTTTGCAAGA AGGTAGCGGT TTGGTTTTTG GTTCTGAAGA AAATGATGTG 
ATACGGACCT CTGGACCCTC CGTAGTATTT GCTGGTGCTG GCGACGATGG CGTTAGAATG
GGTTATTCCA ATGATATTGC CTATCTGGGA GAGGGCAATG ATGTGGCCTA TGCGGAAGCG
GGCAATGATC TAATCTTCGG CGAAGCCGGT GATGATCTTA TGTATGGAGG CAGCGGCAAT
GATTGGCTTG ACGGGGGTGA GGGCAATGAC TTCCTGTGGG GCGGAGAAGG CAGTGATCAG
CTTTTCGGCA AGGAGGGAGA CGATACGATC TATGGTGTAA CCGGCACCAA TGCCCTCTAT
GGTTCTACGG GTAACGATCT AATTATGGGG GGTGATCAAT CGGACGTTAT CTTTAGTGGC
GAGGACGATG ACGTGGTGCT GGGAGGCGAT GGCGGCGACT GGATTTCCGG CGGCTCGGGC
CATAACCAAA TTTATGGTCA GGGGGGTGAT GATATTATTT ATGGTTCGGG TAGTAATGAC
GATGGCGACC GCTCCAATGA AATCTTTTAT ACTGGTAATG ATGGCACTGA TACGGTGAAT
CGCTTCAATG CGGAAAGCGA TCAGTTCGTG ATTGCCGCCG ACATCAATGG TACGGGCATC
GCAAGTATCG ACGATCTCTC CTCCCGCGTG AGCAACTTTA CTGACGAAGT TGGCGAGCCT
GGCGCCGTGA TTGATTTGGG CGAAGGTAGC AGCATTCAAC TGGTTGGCGT TGAGGCCAGC
GAAGTTACCG CTAATCTTTC CGATTATTTC ACTGTGGCCT GA
 
Protein sequence
MADFLQEGSG LVFGSEENDV IRTSGPSVVF AGAGDDGVRM GYSNDIAYLG EGNDVAYAEA 
GNDLIFGEAG DDLMYGGSGN DWLDGGEGND FLWGGEGSDQ LFGKEGDDTI YGVTGTNALY
GSTGNDLIMG GDQSDVIFSG EDDDVVLGGD GGDWISGGSG HNQIYGQGGD DIIYGSGSND
DGDRSNEIFY TGNDGTDTVN RFNAESDQFV IAADINGTGI ASIDDLSSRV SNFTDEVGEP
GAVIDLGEGS SIQLVGVEAS EVTANLSDYF TVA