Gene Noc_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1805 
Symbol 
ID3705322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2042950 
End bp2043963 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content55% 
IMG OID637738288 
Productdeath-on-curing protein 
Protein accessionYP_343805 
Protein GI77165280 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID[TIGR01550] death-on-curing family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACC AGCAAATACA GATTTTTACC TCAAACGATG GCCAGGCCCA GCTGGAAGTG 
GCGCTGGAGC AGGGAACGGT GTGGTTGAGC CAGGCGCAGA TGTCAGTATT GTTCGATACC
TCGACAGACA ATATTGGCTT ACACCTGAAA AACATCTATC AGGAAGGTGA GCTGGAGGAA
GCGGCAACTA CCGAGGATTT CTCGGTAGTT CGTCAGGAGG GCACGCGACA GGTTCGTCGC
CGCATCAAAC ACTACAATCT CGATGCCATT ATCTCCGTGG GTTACCGGGT CAGCTCCAAG
CGCGCCACCC AGTTCCGCCA ATGGGCCACC CAAGTCCTCA AAGACCATCT GGTACAGGGC
TACACCCTCA ACCAGCGCCG CTTAGCTGAG CGGGGCATCG AGTTCGAGCA GGCGGTGAAT
TTGCTCAGCC GCACGCTCGC CAACCAAGGC ATGGTTTCCG CCGAAGGCGA AGCCGTGGCC
CAAGTAATCA GCGATTACGC CCGCTCCTGG AGCCTGCTGC AGGGTTATGA TGAACAACAT
TTGACAGAGA TCGGCATTAA GCAGACCGAT ATGCTGCCGC TAGCGCTGGA TGAGGCGCTG
CGGGCCATTA GCGAGCTTAA GCAAACTTTG ATCGCCAAGG ACGAAGCCAC CGAGCTGTTT
GGTCAGATTC GCGGTGATGG GTTGGCCTCG GCCTTGGCCA CCATTGAACA GGGCTTTGGC
GATGAGTTGT TCTACCCGAA CGTGGCAAGC CGCGCCGCCC ACTTGCTCTA TTTTGTGATC
AAAAATCATC CCCTGGCGGA CGGTAATAAA CGGACAGGCT CATTTTTGTT TTTGTGGTAT
CTGCAACGCA ACCGGCACCT ATTAGCCAAA CCGGTAGCAC AATTGATCAA TGACAACACC
CTGGTAGCCC TGGCGCTGCT GGTGGCCGAA AGCTTGCCGG ATCAGAAAAC CCTGATGATC
CGGCTTATTG AGCATTTCAT TCTGCTTAAG GAGCCCGCCG GGCATAAGGA CTGA
 
Protein sequence
MNDQQIQIFT SNDGQAQLEV ALEQGTVWLS QAQMSVLFDT STDNIGLHLK NIYQEGELEE 
AATTEDFSVV RQEGTRQVRR RIKHYNLDAI ISVGYRVSSK RATQFRQWAT QVLKDHLVQG
YTLNQRRLAE RGIEFEQAVN LLSRTLANQG MVSAEGEAVA QVISDYARSW SLLQGYDEQH
LTEIGIKQTD MLPLALDEAL RAISELKQTL IAKDEATELF GQIRGDGLAS ALATIEQGFG
DELFYPNVAS RAAHLLYFVI KNHPLADGNK RTGSFLFLWY LQRNRHLLAK PVAQLINDNT
LVALALLVAE SLPDQKTLMI RLIEHFILLK EPAGHKD