Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1733 |
Symbol | fadJ |
ID | 3705050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1940508 |
End bp | 1942742 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738216 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_343735 |
Protein GI | 77165210 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.535937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATG GAACGTTCCG CTCACTGCGG ATTGAAAAGC GGGAAGATAA CGCAGCTATT ATTTGGCTTG ATGTGCCTGA TGTTTCGGTC AATACATTGC AGGCGGACTT TGCTCAAGAT TTTAACCGAG TGCTTGAACA ATTGTCGGCG GATAAGGATT TAGAGGTAGT GGTGCTGGCC TCGGCCAAGG AGGATTTTAT CGCGGGCGCC GATATCAAGA TGTTGACCCA ATTGCCGGAT GCTGAGGCGG CCCGGCAGCT CTCCCGCACC GCCCAACAAG CGATGGATCA GCTGGAAGCT TTTCCTCTCC CCATTGTAGC GGCGATCCAC GGGGTCTGCC TGGGCGGGGG GCTGGAGGTG GCCTTGGCTT GCCGGGGGCG TGTGGCCACC AATAGCGCCC GCACCCGGTT GGGCCAGCCA GAAGTCAAAT TGGGGGTTAT TCCTGGCGTA GGGGGCACCC AGCGGTTACC TCGTCTGGTA GGTTTGGAGA CGGCTCTGAA TATGATATTA ACGGGTAAAA CCCATCCTGC TTCTAAAGCC TGCGCTCTGG GATTGGTTGA CGAGGTGGTG CCTCGGCCAG TGCTGTTGGA AGCGGCTTTG GCCCGTGCCC GTGAACTTGT TCAGGAAAAT AACAAGGAGC CTGAAGCGGG CACATTTCAA CAGGTTAGCC GAATTTTCGG CAGCATGTTG AGCTTGCGGA AGGTTAGATC GCTGTTGTTG GAAAAAAATT CCCTCGGGCG CTCCATGGTG TTTAATCAGG CTAAGAAAAA GGTGCTTTCC CATACCCATG GCAATCTACC GGCGCCCCTC CAGGCGCTTG AAGTCATCAA GACGGGTATG GAGCAGGGCT TGGAAGCGGG CTTTAAAGCG GAAGTGGAGG CTTTTGGCGA CTTGGCTGTG AGCACCAAGG CCCGTAATCT CATGGCGTTG TTTTTGGCGA AATCAGCGCT GAAAAAAGAT CCGGGCACCG ATGAAGAGAT AGCACCCCGG TTAGTGCGTA AAGTGGGCGT TTTGGGAGCG GGCTTGATGG GAAGTGGCAT AGCCTATGTA ACCGCTGCGA AAGCGCGTTT GCCGGTGCGC TTAAAAGACC TTAAGCAGGA GGTCTTACGG CAAGGGCTCC GCACTTTATG GAATGCCGTC ACTGAGCAAG TTAAAAAACG GCGCATGACG GCGGGAGAAG GCGATCGGGT ACTTGCTTTG GTCCGTCCCA CCACCGAATA CACCGGCTTT AAACAAGCCG ATGTGGTAAT TGAGGCGGTG GTGGAAGATC TTAAGGTAAA ACAGCAGGTG TTGCGTGAAG TAGAAGCCCA TGGCGGTCCG GAGATGATTT TTGCTTCCAA TACTTCCTCT ATCCCCATTC ATAAAATTGC CGAGGCGAGT GATCGTCCCG AGGCGGTGGT TGGCATGCAT TATTTCTCGC CCGTGCCCAA GGTGCCGCTC CTTGAAGTTA TTGTAACTGA GAAAACCGTG CCGGAGGTAG TCGCCACCTG TGTTGCACTG GGTAAACAGC AAAACAAAAC AGTAATCGTG GTTCGTGATG GGGCGGGTTT TTATACCACG CGGATACTGG CCCCTTATAT CAATGAGGCC ACGCATCTTT TAGCCGAGGG AGTCTCCATT CAGGATATCG ATAAGGCATT GGTTAATTTT GGCTTTCCCG TAGGACCTCT CAAACTTTTG GATGAGGTGG GTATCGATGT GGTGCAAAAG ATCGCCCATA TCCTGGAGGA AGCCTTTGGT GAGCGGATGA AACCTACATC AGTGCTCGCA AAATTAGTGA GTTCCCATCG CTTGGGCAAA AAAAATGGCC AGGGTTTATA TCGTTATCAG AAAATGGATG GGATTTTTAA AGGAAAAGGA AAGCAGGTAG ATCAATCCGT TTATCAGTCA TTAGGTATCA AACCAGATAA AAAGTTAGAG GCCAATGAAA TTGCGATGCG TTGCCTTCTA CCGATGATTA ATGAGGCGGT GCATTGCTAC CACGAGGGTA TTTTACGGTC AGCCCGGGAC GGCGATGTAG GCGCTGTTTT TGGGTTAGGT TTTCCACCTT TTTTAGGGGG TCCTTTTCGC TTTATTGATA ACCAGGGATT GAGGAATGTT TCCAAGCAAC TCGTCCATTA CCAAGAGCAG TTTGGTAAAC GTTTTACGCC TGCTTCTCTC CTAGTTGATC TAGCCCAACA AGGAATCGGT TTTTATGATG AAAATGTGCC TCCGCCAGGG AAAACCCTTT CCTGA
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Protein sequence | MTNGTFRSLR IEKREDNAAI IWLDVPDVSV NTLQADFAQD FNRVLEQLSA DKDLEVVVLA SAKEDFIAGA DIKMLTQLPD AEAARQLSRT AQQAMDQLEA FPLPIVAAIH GVCLGGGLEV ALACRGRVAT NSARTRLGQP EVKLGVIPGV GGTQRLPRLV GLETALNMIL TGKTHPASKA CALGLVDEVV PRPVLLEAAL ARARELVQEN NKEPEAGTFQ QVSRIFGSML SLRKVRSLLL EKNSLGRSMV FNQAKKKVLS HTHGNLPAPL QALEVIKTGM EQGLEAGFKA EVEAFGDLAV STKARNLMAL FLAKSALKKD PGTDEEIAPR LVRKVGVLGA GLMGSGIAYV TAAKARLPVR LKDLKQEVLR QGLRTLWNAV TEQVKKRRMT AGEGDRVLAL VRPTTEYTGF KQADVVIEAV VEDLKVKQQV LREVEAHGGP EMIFASNTSS IPIHKIAEAS DRPEAVVGMH YFSPVPKVPL LEVIVTEKTV PEVVATCVAL GKQQNKTVIV VRDGAGFYTT RILAPYINEA THLLAEGVSI QDIDKALVNF GFPVGPLKLL DEVGIDVVQK IAHILEEAFG ERMKPTSVLA KLVSSHRLGK KNGQGLYRYQ KMDGIFKGKG KQVDQSVYQS LGIKPDKKLE ANEIAMRCLL PMINEAVHCY HEGILRSARD GDVGAVFGLG FPPFLGGPFR FIDNQGLRNV SKQLVHYQEQ FGKRFTPASL LVDLAQQGIG FYDENVPPPG KTLS
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