Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1705 |
Symbol | |
ID | 3704627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1907764 |
End bp | 1910898 |
Gene Length | 3135 bp |
Protein Length | 1044 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637738186 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_343707 |
Protein GI | 77165182 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCATGA TTTCGGATAT TGAACTACCC TCTCTAGATT CGCCACGGGC TGCGATTAGT GCGGCCTATC TCGCTGATGA AACAGTCTGG GTAAAGTCCT TATTACGTGA GACGGAGTTG GCTCCTGAAG TTAATGAGCG TGTGAAGCGG CGGGCAAGCC AATGGGTACA GTTAGTGCGC GAGAAACGCC GCTGGCATGG AGGTTTGGAT GCTTTTCTCC ATGAATACAA CCTTTCAAGC CAGGAAGGGG TGGTTCTCAT GTGCCTGGCC GAGGCCCTGT TGCGAATCCC TGATGATGAG AATGCGGATC GGCTTATCCA TGACAAACTC CTCAAGGGTG AATGGGATAG GCATCTTGGG CATAGTCATT CGCTCTTTGT GAATGCGTCT ACCTGGGGAT TAATGCTCAC TGGGCGTCTG ATGCGCCTGG AAACACCGTT AATCGATGAT GGCAAGGGTG TGATTAAGCG CCTAGTAAAG CGTGGCGGGG AGCCTTTGGT GCGCTTAGCG CTCCGGCAAG CGATGCGCAT TATTGGGGGT CAATTTATCA TGGCGCCTAG AATTGAACAG GCTTTGACAC AATGCCGTGA AAATGAGCGT TACTCTTTCG ATATGCTAGG TGAAGTCGCC CTGACCCAGG CCCGGGTCGA GCAATACTAT AGTGGCTATC GGCATGCAAT TAGGGTGCTA GGGGAGACAG ATTCAGGCGA GCATAATCGG GAAGCAACAG GAATTTCGGT CAAGCTCTCG GCGCTTCATC CCCGTTACAC GTTTTCCCAG CGAAGGAGAG TGCAAGCGGA GCTAGTTCCC CGGGTATTGG CATTAGCCCG TGAAGCCTGC GCCGCCGACA TTGGGCTTAC ACTAGATGCA GAGGAAGCGG ATCGTTTAGA GTTGATGCTC GATGTTTTTG AGGCGGTATT CCGCGATCCT TCCTTGAGGA GATGGCAAGG GTTTGGGCTA GCACTGCAAG CCTACCAAAA GCGGGCGCTG CCTGTCTTGA ATTATTTGCG GGATCTTGCC CAGAAAGAAG GCCGGTGTAT TCCGGTACGG TTGGTGAAAG GTGCCTATTG GGATACGGAA ATCAAACGTG CCCAGGAACA GGGACTGGCC GGTTATCCAG TTTTTACCCG GAAGGTCAAT ACGGATGTTT CTTTTCTTGC CCTAGCTCGC CGCCTACTCA GTGCCCGCGA TGTGTTCTAC CCTCAATTTG CCTCCCATAA TGCTCATACC GTGGCTTGGG TGCTGGAAAC AGCAGGAGAG CAGCAAGGCT TTGAATTCCA ACGCTTGTAT GGTATGGGGG AATTGCTATA TAGCGCCTTG CGGGAACAGG GAATTAGCGT TCCCTGTCGA GTCTATGCGC CGGTGGGAGG ATATGCTGAT CTGCTGCCTT ATTTAGTGCG TCGCTTGCTG GAAAATGGTG CTAACACTTC TTTTGTCAAC CGGATTGAGG ACGAAGAGGT GCCTATCGAA CAAATAGTGG CGGACCCTTC TGAGTATGTT CGTAGCTTGC CCTCTAAATC CCATCCTAAT ATCCCTTTGC CTCTTCGGCT TTATGGAAAA GTGCGGCGCA ATTCCTTAGG GATTAATCTG AATGATCCCA CTAGCTTGGA GCGTTTAATG GCCGAGCTTG GCAGGGCTAT GGAGAAGCAA AGGCAAGCTT TGCCTTTGGT GAGCGGCGAA GCCGGCAAGG GGACAGTCCA AGTAGTGCGG GACCCTAGCG ATCGGCGGCG GGTGCTGGGT ACCGTAGTAG AAGCCGATCA AGAGGCTATC GCCGAGGCTC TTTCGGAAGC GGATGCTGTT GCAGCGGGTT GGGAAGCTAC CTCTGTTTTG GGGCGAGCTG AGTGTTTAGA GCAGGCGGCT GATTTATTCG AGGAGCGTCA AGTTGAGTTG ATGGCTCTAT GTATTCGTGA AGGAGGGAAA ACTGTTGCGG ATTCGCTTGC CGAAGTGCGG GAAGCGGTAG ATGCTTGTCG CTATTATGCT GCCGAAGCCC GTCGGCTTTT TGCGATGCCT AAGATGCTGC CAGGACCCAC CGGCGAGCAT AATGAGCTGA CTCTTCACGG ACGCGGCGTG TTTGTTTGCA TTAGTCCTTG GAATTTTCCT CTGGCTATCT TTACGGGCCA GGTAGCGGCT GCGCTGGTAG CGGGCAATAC AGTGATTGCA AAGCCCGCGG GGCAGACACC CTTGATAGCG GCATTGGTGG TGCAGTGGTT CCATGAGGCG GGAATTCCGC CTCGGGTTTT GCACTTTCTC CCTGGCAGAG GTTCAAGGGT AGGTCAGGCG TTAGTGGCCG ATTACCGTAT CAGCGGGGTT GCCTTTACGG GCTCAACCAG GACCGCTGCT GTTATTAACC AAGTGCTGGC GGAACGCAAA GGGCCTATCG TGCCACTTAT CGCCGAAACC GGCGGCCAGA ATGCCATGAT CGTGGATAGT TCCGCGCTGC CAGAGCAAGT GGTGGTGGAT GTCATGACGT CGGCTTTTAA TAGTGCCGGC CAACGCTGTT CGGCGCTGCG GGTGTTGTTT CTTCAGGAAG AGGTTGCCGA GCCTATATTG GAAATGCTCA TCGGCGCGAT GGAGGAATTG AGGCTGGGGG AGCCGGGACG GCTGGATACC GATATAGGAC CGCTTATCGA TGGGGAGGCA AGGGCGCGTT TGGAAACCCA CTGCCAGCGC ATGAATCGAG AGGCGCGCTT GTTGTGCCGT TTATCCTTGC CTGAAGCTAC CCAAAACGGC TACTATTTCG CACCCCGAGT CTACGAATTA GAAAATTTGG CGGAACTTAC CTATGAGGTT TTTGGCCCTG TCTTGCATGT TATCCGCTAT TCATCCAAGC ACCTCAATAA GGTGATTGCC TCTATCAACC GAACTGGATA CGGCCTAACT TTGGGAATTC ATAGCCGCGT GGATGAAACA GTGCGTTACA TTCAGAACCG GGTTCATGCA GGCAATATCT ATGTCAATCG CAATATGATC GGTGCTGTAG TGGGCGTGCA ACCCTTTGGA GGTGAGAGGC TTTCGGGAAC CGGCCCAAAG GCCGGTGGTC CCCATTATTT ATTGCGCTTT GCCACCGAGC GTTCAACCAG CATCAATATG GCTGCGGTGG GGGGGAATAC CGATCTCCTG TCATTGGGGG AGTAA
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Protein sequence | MVMISDIELP SLDSPRAAIS AAYLADETVW VKSLLRETEL APEVNERVKR RASQWVQLVR EKRRWHGGLD AFLHEYNLSS QEGVVLMCLA EALLRIPDDE NADRLIHDKL LKGEWDRHLG HSHSLFVNAS TWGLMLTGRL MRLETPLIDD GKGVIKRLVK RGGEPLVRLA LRQAMRIIGG QFIMAPRIEQ ALTQCRENER YSFDMLGEVA LTQARVEQYY SGYRHAIRVL GETDSGEHNR EATGISVKLS ALHPRYTFSQ RRRVQAELVP RVLALAREAC AADIGLTLDA EEADRLELML DVFEAVFRDP SLRRWQGFGL ALQAYQKRAL PVLNYLRDLA QKEGRCIPVR LVKGAYWDTE IKRAQEQGLA GYPVFTRKVN TDVSFLALAR RLLSARDVFY PQFASHNAHT VAWVLETAGE QQGFEFQRLY GMGELLYSAL REQGISVPCR VYAPVGGYAD LLPYLVRRLL ENGANTSFVN RIEDEEVPIE QIVADPSEYV RSLPSKSHPN IPLPLRLYGK VRRNSLGINL NDPTSLERLM AELGRAMEKQ RQALPLVSGE AGKGTVQVVR DPSDRRRVLG TVVEADQEAI AEALSEADAV AAGWEATSVL GRAECLEQAA DLFEERQVEL MALCIREGGK TVADSLAEVR EAVDACRYYA AEARRLFAMP KMLPGPTGEH NELTLHGRGV FVCISPWNFP LAIFTGQVAA ALVAGNTVIA KPAGQTPLIA ALVVQWFHEA GIPPRVLHFL PGRGSRVGQA LVADYRISGV AFTGSTRTAA VINQVLAERK GPIVPLIAET GGQNAMIVDS SALPEQVVVD VMTSAFNSAG QRCSALRVLF LQEEVAEPIL EMLIGAMEEL RLGEPGRLDT DIGPLIDGEA RARLETHCQR MNREARLLCR LSLPEATQNG YYFAPRVYEL ENLAELTYEV FGPVLHVIRY SSKHLNKVIA SINRTGYGLT LGIHSRVDET VRYIQNRVHA GNIYVNRNMI GAVVGVQPFG GERLSGTGPK AGGPHYLLRF ATERSTSINM AAVGGNTDLL SLGE
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