| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1700 |
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| Symbol | |
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| ID | 3705613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1902839 |
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| End bp | 1904500 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637738181 |
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| Product | PAS sensor, signal transduction histidine kinase |
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| Protein accession | YP_343702 |
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| Protein GI | 77165177 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.012241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGCTA ACTCAAACAT CGTCCCAAAA ATCAATCTAC TCCTTATCGA AGATAATCCA
GGTGATGTCC GGCTGGTACA ACTTGCCCTA CAAGAGGTAA CCGGGGTTAA GTTCGAGACT
ACGGCGGTAG AGCGACTCAG CCAAGCGCTG TCCTTGCTCG AGCATCAGCA ATTTGATGCC
ATTTTACTAG ATTTAACCCT ACCTGACTGT CACGGTCTCC ATACTTTTAG CCAGGTAAAA
GAGGCTGCAC CTCAGCTACC CATCGTGGTG CTAAGCGGTT TATCTAATGA AGAACTAGCC
ATCGAGGCAG TAAAACTCGG AGCCCAGGAT TATTTAGTCA AAGGTCAAAG TAATAATCAG
CTGGCGGGGC GAGCATTACG TTATGCGGTG GAAAGAAAGC AAACTGAAAC TGTATTGCGC
CAAGCTCGAG ATGAATTGGA GCAACGCATC GCTGAGCGAA CAGCCCATCT GAAGAAGGCC
AATTGCCAGC TTCAGCAAGA AATCCTCCAG CGGAAACGCA CTGAAGCATT GCTCCGAAAA
GAACGGGACT TTAGCTCTAT GATCTTGGAT ACTGCCGATG TCCTGGTGGT AATTCTCAAC
AGTCAGGGCC AGATTGTTCG CCTTAACCGA GCCTTCCAGA AAATTAGCGG ATATCCTTCC
GAGGAAGCGC AAGGACGGTA TCTTTGGGAG CTTACCTATT TTCCAGACCA AATAAAAAAA
GACACCAGGG AAAAACTCAA ACAATGGCAA ACACCAAACA CTCCCAAGAA GCATGAAAGC
TATTGGCAAG CGAAAACGGG GGAGCGATAC CTGATCGCTT GGTCAAGCAC AGCACTATTC
GCCCCCAGTG GGGCTCTAGA TTATGTTATT TATACTGGTA TCGATATTAC CGAGCAAAGA
CAGGCTGAAG ATCTTGCTCG GCAGCGTTTG CTTGAGCTAG CTCATATCTC CCGTTTAAGC
ACCCTCGGGG AAATGGCTGC CCAGATTGCC CACGAACTCA ACCAACCCCT AGGAGCCATC
ACTACGTATA GCGATATTTG CTTGCGCACT CTTGAGCCAC AAACCTCAAA ACATCAACCA
CTTCGCGATA TATTGGAGGA AATCGCAACC CAAGCCGAGC GAGGAGGAAA AATTATTCGT
CATCTTCGTA ACCTTATCCA CAAAAAAGAG CAACGATGGG CTTCTCTGGC AATCAACGAA
CTCATTCGTG AAACCGTTGG TATCATGCAG GCTGAAGCAC GGTGGCAAAA CATTACGATT
AAACTCGACT TGCAAACGTC ACTTCCTTCT ATTACCGCTG ATAGCCTTCT ACTCCAACAG
GTATTTCTCA ATCTGATGCG TAATGCCTTC GATGCCATGA TAGCGAACCC CTGCAACGGT
GATCGGCAAA TCAGAATTAA AACGTCATGG ATAAAAAAAA CCGCTATTGA AATTCAAATC
CAAGATACAG GGCCGGGGCT ACCAGATAAC CTCAAGCAGA AAATATTTGA GCCTTTTTTC
ACGACTAAAA CGGAAGGTAT GGGAATGGGA TTGCCGATTT GTCAATCCAT TATCGAAGCC
CATGGAGGTT GGCTTTTAGC GACTGATAAT AAGCACGGTG GTGCTGTATT TCAGCTTAGG
CTGCCAATTA TCTCCCCAAA GAATACTCTT CATGGCAGCT AA
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| Protein sequence | MLANSNIVPK INLLLIEDNP GDVRLVQLAL QEVTGVKFET TAVERLSQAL SLLEHQQFDA
ILLDLTLPDC HGLHTFSQVK EAAPQLPIVV LSGLSNEELA IEAVKLGAQD YLVKGQSNNQ
LAGRALRYAV ERKQTETVLR QARDELEQRI AERTAHLKKA NCQLQQEILQ RKRTEALLRK
ERDFSSMILD TADVLVVILN SQGQIVRLNR AFQKISGYPS EEAQGRYLWE LTYFPDQIKK
DTREKLKQWQ TPNTPKKHES YWQAKTGERY LIAWSSTALF APSGALDYVI YTGIDITEQR
QAEDLARQRL LELAHISRLS TLGEMAAQIA HELNQPLGAI TTYSDICLRT LEPQTSKHQP
LRDILEEIAT QAERGGKIIR HLRNLIHKKE QRWASLAINE LIRETVGIMQ AEARWQNITI
KLDLQTSLPS ITADSLLLQQ VFLNLMRNAF DAMIANPCNG DRQIRIKTSW IKKTAIEIQI
QDTGPGLPDN LKQKIFEPFF TTKTEGMGMG LPICQSIIEA HGGWLLATDN KHGGAVFQLR
LPIISPKNTL HGS
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