| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1681 |
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| Symbol | |
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| ID | 3705627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1875794 |
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| End bp | 1877641 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637738159 |
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| Product | Alpha amylase |
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| Protein accession | YP_343683 |
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| Protein GI | 77165158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCACT GCCATGGTAT GCCTTTTGGC GCTGAAGTGA CAGAAAAAGG TACCGTGCGT
TTTCGGTTAT GGGCGCCTGC CGCTAAGCAA GTGGAGTTAT GCTTGGAGGA TACGCTAGAA
GTAGTCCCCT TAGCTATGAC TCCTAAAGAA GAGGGTTGGT TTGAGCTAGA AACTAAAGAG
GCTGGTCCGG GCAGTTTATA CTGCTATCAG ATCAATGGTG GGATGCGGGT TCCTGATCCC
GCTTCTCGAT TTCAGCCCCA AGATATCCAC GGTCCCAGCG AGGTGGTTGA TCCAGCTACT
TTTAAATGGC AGGAAGAGGG ATGGAATGGA CGACCTTGGG AAGAGGCCGT TATTTATGAA
ATCCATGTAG GAACTTTTAC CCCAGAGGGT ACTTTTCGAG GATTGGAGAG TCACCTGGAG
CATCTAGCAA AATTAGGGGT AACCGCATTG GAACTGATGC CGGTTGCCGA TTTCCCTGGC
CGTTGGAATT GGGGTTACGA TGGTGTTTCC TTGTTTGCAC CAGATAGCCG TTATGGTCGG
CCCCACGATC TCAAATCCCT TGTGCAAGCT GCCCATGCTT GTGGATTAAT GATATTTTTA
GACGTGGTGT ATAATCATTT CGGTCCGGAA GGCAACTATC TCCATCAATA TGCCCCAGAC
TTTTTTACAG AACGCCACCA AACTCCATGG GGGGCAGCTA TCAATTTTGA TGGGAAGAAT
GCCCATTGGG TCCGGCAGTT TTTTATCCAT AATGCTCTCT TCTGGCTGGA GGAATACCAA
TTTGATGGCC TTCGGTTGGA TGCGGTTCAT GCGATTCAAG ATGATTCTAA GTTCCATATT
CTTGAAGAGT TGGCAGAGAC GATTTTCTGC CATCTAGATT CCAGGCGGCG TATACATCTG
GTGCTAGAAA ATGATAATAA TATAGCCCGT TACCTTACCC GGAAGCCTAA CGGACAACCC
CGTTGGTACA CTGCGCAATG GAATGATGAT ATCCACCATG CCTTGCATGT ACTCACCACT
CAGGAAACTA CAGGTTATTA CTTAGACTAT GCCGATCAGC CTATTGCTCA TCTAGGCCGT
TGTTTGAGCG AAGGTTTTGG TTATCAAGGG CAACATTCTC CTTACAGGGA AGGCAAACCC
CGTGGCGAGC CTAGCAAGAT TTTACCGCCA AGCGCTTTTG TAACCTTCTT TCAAAACCAC
GATCAAGTGG GTAACAGGGC TTTCGGTGAG CGAATAACGG CTTTAATAAC ACCTGAAGAA
GTGAAGGCAT TAACCGCGTT GCTATTGCTC TCTCCTTTCC CGCCCCTTTT ATTTATGGGC
CAGGAGTGGG GATCAACTCA ACCCTTTCCT TTTTTTTGCG ATTTTAGTGA GGATTTGGCT
GCAAGTGTTC GGGAGGGTCG GCGAAGGGAA TTCGCCCATT TTCCTGAATT CAATAATCCA
GCGGCCCAAG AACGAATTCC GGATCCTACC GCTCAGGCGA CCTTTGACAA TGCTGTTTTA
AACTGGACTC ACGCAACCAA TGGAAAAGGG AAAGAATGGT TTGAGTTACA TCAAAATCTG
CTAAAACTAC GGCGCCAATG GATCATTCCC AGGCTAGCTG CTATGAGAAA AAACAACGGT
TGTTATATAC CCTTAGGTAA GCAGGCACTA CAAGTTCGGT GGCAATTAGG CGATGGGGCA
CAATTAACAA TATTAGCTAA CTTAGGAAAA ATTTCTATTT TCTTATCGAC TCTCCCTTCC
GGAGAAGTAC TTTTTACCAC CTTTTCAGAT TTAAATAGGA TACTTATCCA CAAAAATCTG
CCCCCTAAGA CGGTAATTTG GTTTCTCAAA GAGAATTCCA GTGATTGA
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| Protein sequence | MQHCHGMPFG AEVTEKGTVR FRLWAPAAKQ VELCLEDTLE VVPLAMTPKE EGWFELETKE
AGPGSLYCYQ INGGMRVPDP ASRFQPQDIH GPSEVVDPAT FKWQEEGWNG RPWEEAVIYE
IHVGTFTPEG TFRGLESHLE HLAKLGVTAL ELMPVADFPG RWNWGYDGVS LFAPDSRYGR
PHDLKSLVQA AHACGLMIFL DVVYNHFGPE GNYLHQYAPD FFTERHQTPW GAAINFDGKN
AHWVRQFFIH NALFWLEEYQ FDGLRLDAVH AIQDDSKFHI LEELAETIFC HLDSRRRIHL
VLENDNNIAR YLTRKPNGQP RWYTAQWNDD IHHALHVLTT QETTGYYLDY ADQPIAHLGR
CLSEGFGYQG QHSPYREGKP RGEPSKILPP SAFVTFFQNH DQVGNRAFGE RITALITPEE
VKALTALLLL SPFPPLLFMG QEWGSTQPFP FFCDFSEDLA ASVREGRRRE FAHFPEFNNP
AAQERIPDPT AQATFDNAVL NWTHATNGKG KEWFELHQNL LKLRRQWIIP RLAAMRKNNG
CYIPLGKQAL QVRWQLGDGA QLTILANLGK ISIFLSTLPS GEVLFTTFSD LNRILIHKNL
PPKTVIWFLK ENSSD
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