| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1674 |
|---|
| Symbol | |
|---|
| ID | 3705619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1865508 |
|---|
| End bp | 1867946 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637738151 |
|---|
| Product | peptidase S16, ATP-dependent protease La |
|---|
| Protein accession | YP_343676 |
|---|
| Protein GI | 77165151 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.37162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAG ACGGCACGAA GACCAATGCA GTTAAAGCCA GAGGGATTTC TACCCCGGTG
TTACCGTTGC GTGATGTCGT TGTTTACCCC TATATGGTTA TTCCCCTTTT CGTGGGACGT
GAAAAATCTA TTAGAGCACT TGAGGCGGCA ATTGAGGCCA ATCAACAAAT ATTGTTGGTG
GCCCAGAAGA ACCCTGTCCA GGATGATCCT CAGCTTGAGG ATATTTACGG TATCGGAACA
CTAGCTAATA TATTACAACT GCTTAAACTT CCCGATGGAA CGGTAAAAGT GCTCGTGGAA
GGCAGTGAGA GAGCTCAGAT TAATCAGTAT ATCGGTACGG AAGATTATTT TTGCGCACAA
TTATTTCATT ATAAAAATGT TGGAGAGGAT AATCGAGAAA CAGAAATACT TACCCGCTCT
TTGCTTAACC AGTTTGAGCA ATACGTTAAG CTTAACAAAA AAGTGCCGCC TGAAATTCTA
TCTTCGCTTT CAAGTATTGA TGATTCAGGC CGTCTGGCGG ATACCATTGC TGCCCATATG
GCACTTAAAA TAGAGGAAAA GCAGGCTGTT CTAGAAATTA ATAACGTTCG AGAACGCTTA
GAGCACTTAT TAGGTCTTCT GGAATCAGAA ATTGATATTC TCCAAGTAGA GAAACGTATT
CGTGGACGTG TTAAGCGGCA AATGGAGAAA AGCCAACGTG AATATTATTT AAATGAGCAA
GCGAAGGCTA TTCAAAAGGA ATTAAGTGAG CTTGAAGATG TGCCTAATGA AATCGAAGAA
CTTACTAATA AGATTGAAAA AGCAGGCATG TCGAAGGAAG CCAAGGCTAA AGCTGTGGTG
GAGCTGAATA AGTTGCAGTT GATGTCACCC ATGTCCGCCG AAGCGACGGT AGTACGCAAC
TATATCGATT GGTTGGTAAG CGTGCCTTGG AAAAAAAGAA ATCGAGTTCG TTTAAATTTG
ACTAAGGCAG AGGCGGTGCT TGAAGATGAT CATTACGGCT TAGAAAAGGT GAAGGAGCGA
ATCCTTGAAT ACCTAGCTGT ACAGCAACGG GTAAAGCAGC TTAAAGGACC TATATTATGC
TTGGTGGGTC CTCCCGGGGT AGGAAAAACC TCTATCGCGC GCTCCATTGC TCGAGCAACC
AACCGCAAAT TTGTTCGTAT GTCTTTGGGG GGCGTCCGTG ATGAAGCTGA AATCCGAGGA
CATCGCCGCA CTTATATTGG CTCGATGCCT GGCAAGATTA TCCAAAACTT AGCTAAAAAT
GGCACCCGAA ATCCCTTATT TCTTCTGGAT GAAGTTGACA AGATGGCAAT GGATTTTCGT
GGTGATCCTG CGTCGGCACT ATTAGAAGTT CTAGATCCTG AGCAGAACAA CACCTTTAAT
GATCATTACC TAGAGGTGGA TTATGATCTC TCAGAAATCA TGTTTGTGAC TACTGCGAAT
ACTTTAAATA TTCCGGGACC TTTGCTTGAT AGGATGGAAG TTATTCGGAT CTCGGGTTAT
ACGGAAGATG AGAAAATCAA TATTGCTACC CGTTATCTTG TTCCAAAGTC AACTAAGGCT
AATGGCCTTA GGAAGGGAGA AATTAACCTG TCTGAAGGCG CAGTAAAGGA TATTATTCGT
TACTACACAA GGGAAGCTGG CGTCCGGAAC TTAGAGCGAG AGATTTCTAA GATTTGCCGT
AAAGTAGTGA AGCGGATTCA ATTAAAGCCA AATGTTAAAA AAATTGCCGT AAGCGCTCGT
AATTTAGATA CTTTTTTAGG AGTAAAACAA TACCGTTTTG GGCGGGCTGA TGAACAAGAT
CGAGTAGGTC AAGTGACAGG ATTAGCCTGG ACAGAGGTAG GCGGGGATTT GCTTACGATC
GAGTCGGCAG TAATACCTGG CAAGGGAAAG GCGACCTATA CCGGACAATT AGGTGAGGTT
ATGCAAGAAT CAATCCAAGC GGCAACTACA GTGGTACGTC ATAGAGCTGA ATGGCTAGGT
ATTGATCCCA ATTTTTATCA AAATTATGAT ATCCATGTCC ATGTACCAGA AGGTGCGATT
CCCAAAGACG GTCCAAGCGC AGGAATCGGC ATGTGCACAG CGTTAGTTTC AGCCCTGACT
GATATTCCTG TACGAGCCAA TGTGGCAATG ACGGGGGAGA TTACTCTGCG AGGAGAGGTA
CTTCCCATTG GTGGAGTAAA GGAGAAGCTG CTCGCGGCCT TACGGGGCGG CATTGAAATT
GTGCTCATTC CAGAAGAGAA TTGTAAAGAT TTAGCTGAAA TCCCAAAAAA CATCACCCAG
AATCTTGATA TTCGCCCTAT TAAATGGGTT GAAGATGTCT TTACTATTGC CTTGCAGCGC
ATGCCCGAAG AGAAAAAGAG CAATGATGAA CCGATTGTAA ATAAAAAAGG GGAAACTATC
GGACGCCGAG GAAAATCAGC ATTAGTAAGA ACCCACTAA
|
|---|
| Protein sequence | MEKDGTKTNA VKARGISTPV LPLRDVVVYP YMVIPLFVGR EKSIRALEAA IEANQQILLV
AQKNPVQDDP QLEDIYGIGT LANILQLLKL PDGTVKVLVE GSERAQINQY IGTEDYFCAQ
LFHYKNVGED NRETEILTRS LLNQFEQYVK LNKKVPPEIL SSLSSIDDSG RLADTIAAHM
ALKIEEKQAV LEINNVRERL EHLLGLLESE IDILQVEKRI RGRVKRQMEK SQREYYLNEQ
AKAIQKELSE LEDVPNEIEE LTNKIEKAGM SKEAKAKAVV ELNKLQLMSP MSAEATVVRN
YIDWLVSVPW KKRNRVRLNL TKAEAVLEDD HYGLEKVKER ILEYLAVQQR VKQLKGPILC
LVGPPGVGKT SIARSIARAT NRKFVRMSLG GVRDEAEIRG HRRTYIGSMP GKIIQNLAKN
GTRNPLFLLD EVDKMAMDFR GDPASALLEV LDPEQNNTFN DHYLEVDYDL SEIMFVTTAN
TLNIPGPLLD RMEVIRISGY TEDEKINIAT RYLVPKSTKA NGLRKGEINL SEGAVKDIIR
YYTREAGVRN LEREISKICR KVVKRIQLKP NVKKIAVSAR NLDTFLGVKQ YRFGRADEQD
RVGQVTGLAW TEVGGDLLTI ESAVIPGKGK ATYTGQLGEV MQESIQAATT VVRHRAEWLG
IDPNFYQNYD IHVHVPEGAI PKDGPSAGIG MCTALVSALT DIPVRANVAM TGEITLRGEV
LPIGGVKEKL LAALRGGIEI VLIPEENCKD LAEIPKNITQ NLDIRPIKWV EDVFTIALQR
MPEEKKSNDE PIVNKKGETI GRRGKSALVR TH
|
|---|
| |